Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER128W.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-96 | [1..203] | [1..203] |
|
|
9.0E-24 | [3..76] | [13..76] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MINEYVARKV ALKDMQPCAI CSKPSTTVLY NASGPDWLYT CEIHLQDNPQ FVIPLYSTEY 60
61 NEAVAQLKLV KGKMDSLTSA QTQLGSWDGW VTKIFSKKEK E
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.850 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.840 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.818 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.786 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.782 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.685 | N/A | N/A | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.648 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.644 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.611 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.587 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.544 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.514 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.511 | N/A | N/A | d.82.2 | Frataxin-like |
| View | Download | 0.494 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.453 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.442 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.427 | N/A | N/A | d.189.1 | PX domain |
| View | Download | 0.423 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.407 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.400 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.396 | N/A | N/A | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.394 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.387 | N/A | N/A | d.222.1 | YbaB-like |
| View | Download | 0.381 | N/A | N/A | a.156.1 | S13-like H2TH domain |
| View | Download | 0.379 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.375 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.373 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.370 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.364 | N/A | N/A | a.156.1 | S13-like H2TH domain |
| View | Download | 0.352 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.347 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.342 | N/A | N/A | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.338 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.332 | N/A | N/A | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.316 | N/A | N/A | d.6.1 | Prion-like |
| View | Download | 0.313 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.307 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.302 | N/A | N/A | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.293 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.289 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.283 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.279 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.271 | N/A | N/A | c.55.4 | Translational machinery components |
| View | Download | 0.253 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.253 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.249 | N/A | N/A | d.175.1 | Penicillin binding protein dimerisation domain |
| View | Download | 0.241 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.239 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.234 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.231 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.231 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.230 | N/A | N/A | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.229 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.228 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.228 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.220 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.213 | N/A | N/A | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.212 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.208 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.207 | N/A | N/A | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.204 | N/A | N/A | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.204 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.203 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
|
Region A: Residues: [102-203] |
1 11 21 31 41 51
| | | | | |
1 TNNSKDPDPT TTDSTDTSPQ AKNDAEILSE TKKQYSKILD KVTELQRKNR KYELAKIMFE 60
61 SRLLRKRTEQ VNRERYLKEQ ENYSNTDPEE LLRKHVFPSV PK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.826 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.760 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.670 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.632 | a.24.4 | Hemerythrin |
| View | Download | 0.613 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.605 | a.7.8 | GAT domain |
| View | Download | 0.533 | a.46.1 | Methionine synthase domain |
| View | Download | 0.504 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.489 | a.47.2 | t-snare proteins |
| View | Download | 0.480 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.459 | a.2.7 | tRNA-binding arm |
| View | Download | 0.445 | a.47.2 | t-snare proteins |
| View | Download | 0.442 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.425 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.414 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.382 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.370 | a.47.2 | t-snare proteins |
| View | Download | 0.359 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.324 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.318 | a.1.1 | Globin-like |
| View | Download | 0.315 | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.310 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.295 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.283 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.279 | a.25.1 | Ferritin-like |
| View | Download | 0.269 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.268 | a.24.3 | Cytochromes |
| View | Download | 0.262 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.257 | a.7.7 | BAG domain |
| View | Download | 0.256 | a.25.1 | Ferritin-like |
| View | Download | 0.255 | a.2.5 | Prefoldin |
| View | Download | 0.252 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.231 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.230 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.228 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.226 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.223 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.223 | a.126.1 | Serum albumin-like |
| View | Download | 0.222 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.220 | a.3.1 | Cytochrome c |
| View | Download | 0.217 | a.1.1 | Globin-like |
| View | Download | 0.217 | a.7.7 | BAG domain |
| View | Download | 0.215 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.214 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.212 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.212 | a.2.3 | Chaperone J-domain |
| View | Download | 0.210 | d.26.3 | Chitinase insertion domain |
| View | Download | 0.208 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.203 | d.26.1 | FKBP-like |
| View | Download | 0.201 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.201 | a.2.7 | tRNA-binding arm |
| View | Download | 0.201 | a.2.3 | Chaperone J-domain |
