| Protein: | SCS2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 244 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCS2.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-54 | [3..236] | [6..244] |
|
|
1.0E-51 | [1..244] | [1..244] |
|
|
5.0E-49 | [3..207] | [22..221] |
|
|
3.0E-47 | [7..242] | [12..236] |
|
|
6.0E-47 | [4..238] | [8..234] |
|
|
2.0E-46 | [3..240] | [8..252] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MSAVEISPDV LVYKSPLTEQ STEYASISNN SDQTIAFKVK TTAPKFYCVR PNAAVVAPGE 60
61 TIQVQVIFLG LTEEPAADFK CRDKFLVITL PSPYDLNGKA VADVWSDLEA EFKQQAISKK 120
121 IKVKYLISPD VHPAQNQNIQ ENKETVEPVV QDSEPKEVPA VV
|
| Detection Method: |  |
| Confidence: | 32.522879 |
| Match: | 1grwA_ |
| Description: | Major sperm protein, MSP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-244] |
1 11 21 31 41 51
| | | | | |
1 NEKEVPAEPE TQPPVQVKKE EVPPVVQKTV PHENEKQTSN STPAPQNQIK EAATVPAENE 60
61 SSSMGIFILV ALLILVLGWF YR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.342 | a.3.1 | Cytochrome c |
| View | Download | 0.458 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.471 | a.130.1 | Chorismate mutase II |
| View | Download | 0.618 | a.112.1 | Description not found. |
| View | Download | 0.618 | a.112.1 | Description not found. |
| View | Download | 0.471 | a.130.1 | Chorismate mutase II |
| View | Download | 0.458 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.353 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.353 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.342 | a.3.1 | Cytochrome c |
| View | Download | 0.309 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.308 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.292 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.278 | a.2.3 | Chaperone J-domain |
| View | Download | 0.275 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.273 | a.3.1 | Cytochrome c |
| View | Download | 0.266 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.264 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.247 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.236 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.230 | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.225 | a.2.3 | Chaperone J-domain |
| View | Download | 0.223 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.221 | a.112.1 | Description not found. |
| View | Download | 0.217 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.214 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.213 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.213 | a.3.1 | Cytochrome c |
| View | Download | 0.209 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.207 | a.4.7 | Ribosomal protein L11, C-terminal domain |
