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View Structure Prediction Details

Protein: MAM1
Organism: Saccharomyces cerevisiae
Length: 302 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAM1.

Description E-value Query
Range
Subject
Range
MAM1_YEAST - Monopolin complex subunit MAM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM1 PE=1...
MAM1 - Monopolin, kinetochore associated protein involved in chromosome attachment to meiotic spindle
0.0 [1..302] [1..302]

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Predicted Domain #1
Region A:
Residues: [1-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREKRTISNK DTNYLKFPNK LQRYSRFLSR KISNTSPEKQ PKKNIKEHCL SSYHKEHSVK  60
   61 PKQNSGNVAA KEDKDTQHLQ NNVANEEATE CLTRSNLKKL QEKIFDRELN DIACDHCLCS 120
  121 TENRRDIKYS RLWFLFELEM SENWNENLRL SCYNKYVYSA IDESWKMENI LLKEQEKHYE 180
  181 YFPIGQLLIP NNIDYTNKQK RKENIEDLTI EIDSIIETNH QKKRFLPQSV LIKREDEIAF 240
  241 DDFHLDARKV LNDLSATSEN PFSSSPNTKK IKSKGKTLEV VPKKKNKKII GALERKLHID 300
  301 EN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle