Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YER077C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..688] | [1..688] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MGLKITKGQL RTKDLNQSSS KSSQSSRIGV DTCIFTRMLP RINTAINLTE HLLRRSFHSL 60
61 TNLQKTQVKE RLHELERHGF ILNKTSKQLE RINSKKRRQL KKLQKTAYPK DQAFHILRKF 120
121 HKINNEALAD TKLGP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.338 | a.24.3 | Cytochromes |
| View | Download | 0.394 | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.362 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.340 | a.118.1 | ARM repeat |
| View | Download | 0.432 | a.24.1 | Apolipoprotein |
| View | Download | 0.335 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.330 | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.303 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.300 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.298 | a.118.8 | TPR-like |
| View | Download | 0.297 | a.63.1 | Apolipophorin-III |
| View | Download | 0.282 | a.118.8 | TPR-like |
| View | Download | 0.280 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.279 | a.2.7 | tRNA-binding arm |
| View | Download | 0.269 | a.2.7 | tRNA-binding arm |
| View | Download | 0.268 | a.1.1 | Globin-like |
| View | Download | 0.268 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.263 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.262 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.262 | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.250 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.243 | a.7.7 | BAG domain |
| View | Download | 0.243 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.241 | a.1.1 | Globin-like |
| View | Download | 0.223 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.221 | a.64.1 | Saposin |
|
Region A: Residues: [136-280] |
1 11 21 31 41 51
| | | | | |
1 TSQSDLKFLS LTKDKRLFYT ILGVNGEQLR DSKLIANDVQ KFLKRGQLEK AVFLARLAKK 60
61 KGVVGMNLIM KYYIEVVQSQ QSAVDIFNWR KKWGVPIDQH SITILFNGLS KQENLVSKKY 120
121 GELVLKTIDS LCDKNELTEI EYNTA
|
| Detection Method: | |
| Confidence: | 12.17 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [281-382] |
1 11 21 31 41 51
| | | | | |
1 LAALINCTDE TLVFKLLNKK CPGLKKDSIT YTLMIRSCTR IADEKRFMVV LNDLMNKIPD 60
61 YCVDSKLLFE YCEVICSQKS PKIEKQGMGL WALCEYFQFD KT
|
| Detection Method: | |
| Confidence: | 12.17 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-535] |
1 11 21 31 41 51
| | | | | |
1 IFKKYLTQSD FPTLVPLSHW NINKPFPLNK HVVGLFMNYC LKNKEYDLAM EIFKTLEAQN 60
61 NQMLDQSIYH KYMETVITTR PITCGDECLD IYERVASSAQ ISITRRTLIL VYNAFQRQSL 120
121 KAVINKDASN AEATLHKIRG FIDSVEATYS SKL
|
| Detection Method: | |
| Confidence: | 12.17 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [536-688] |
1 11 21 31 41 51
| | | | | |
1 NGKVYRFNSW KFLFPIVKNL NMNDKVSTVE LKSILDEYLK SLLNGEFGKE FKASIEDKRF 60
61 VTLEGIRLVK VLTERIKLPS LDSEEIASLK GTERKKFLAR RHLLRLKQIL LEDLADIEGN 120
121 SRRKGDSENT STSEERIMED LAELILETSY DKF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.249 | a.39.1 | EF-hand |
| View | Download | 0.315 | a.22.1 | Histone-fold |
| View | Download | 0.359 | a.63.1 | Apolipophorin-III |
| View | Download | 0.308 | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.249 | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.235 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.230 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.221 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.216 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.213 | a.22.1 | Histone-fold |
| View | Download | 0.209 | a.1.1 | Globin-like |
