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View Structure Prediction Details

Protein: GIP2
Organism: Saccharomyces cerevisiae
Length: 548 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIP2.

Description E-value Query
Range
Subject
Range
GIP2_YEAST - GLC7-interacting protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIP2 PE=1 SV=...
GIP2 - Putative regulatory subunit of the protein phosphatase Glc7p, involved in glycogen metabolism; conta...
0.0 [1..548] [1..548]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
5.0E-42 [420..546] [125..248]
gi|3805821 - gi|3805821|emb|CAA77083.1| serine-threonine specific protein phosphatase, glycogen-binding (GL) subu...
6.0E-41 [420..546] [125..248]
gi|13375815, gi|... - gi|13375815|ref|NP_078883.1| protein phosphatase 1, regulatory (inhibitor) subunit 3B [Homo sapiens]...
1.0E-39 [406..546] [114..249]
PPR3A_MOUSE, PP3... - Protein phosphatase 1 regulatory subunit 3A OS=Mus musculus GN=Ppp1r3a PE=1 SV=1, (Q99MR9) Protein p...
4.0E-36 [406..533] [112..230]
gi|46048848, gi|... - gi|46048848|ref|NP_990276.1| smooth muscle protein phosphatase type 1-binding subunit [Gallus gallus...
4.0E-34 [421..542] [134..250]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIKAEQKPQ QFERKNEKLD RNKNQQLPDL ETDFKGYRVN SDLYNKERDG STEETLNSLK  60
   61 FLHKPQRVTQ MRANRFPEEE VQRNTDLNKR IFSAGNDENV DNESGWSKIA AAKNHTSVES 120
  121 LNGSTRPPFK IELPPLSPKS TVPKSFQAEY PEAKSPGNDM NFEYDEEILI PFAPPVYKKS 180
  181 GELLKSSLKR RSKSLPTTPG IRSGNGVQAR DGSPMLIRSK SVHFDQAAPV KYFAEDESPI 240
  241 NVNKTEQHDN CLSFKHKPVN LMVDPEEETK MLSSGLETTS IDDDLTTVAP KGFAHPAKIS 300
  301 NPNNGKGTNN TKLRKSKRFQ NLLKNRTDMP PSKSNKKFVN GGGAHEISDR NSKNYHVVGL 360
  361 YSKNFPILSN K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [372-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPKSLKLNIF INLSQNKKVF LQELSLYIHR DNNYFSNSSS FYNIPNSHNG NDCNGVAKGY  60
   61 NAGCTRLIAG RILVKNIFYD KRVVVRYTWD SWRTTHEVEC VYISDGDGIL PGTNMDIFHF 120
  121 IIDDVSKVDP RGKLEFCIHY STRNDYEREE YWDNNNGNNY KVDVVMDGFN DPFAAAA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 70.455932
Match: PF03370
Description: Putative phosphatase regulatory subunit

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [402-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNNYFSNSSS FYNIPNSHNG NDCNGVAKGY NAGCTRLIAG RILVKNIFYD KRVVVRYTWD  60
   61 SWRTTHEVEC VYISDGDGIL PGTNMDIFHF IIDDVSKVDP RGKLEFCIHY STRNDYEREE 120
  121 YWDNNNGNNY KVDVVMDGFN DPFAAAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 2eefA
Description: No description for 2eefA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle