| Protein: | HVG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 249 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HVG1.
| Description | E-value | Query Range |
Subject Range |
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2.0E-30 | [2..249] | [106..336] |
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9.0E-30 | [4..236] | [95..331] |
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8.0E-29 | [3..245] | [179..403] |
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2.0E-28 | [3..245] | [189..413] |
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4.0E-28 | [3..246] | [179..404] |
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8.0E-28 | [3..242] | [182..403] |
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8.0E-28 | [3..245] | [177..401] |
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Region A: Residues: [1-71] |
1 11 21 31 41 51
| | | | | |
1 MIYTSSKSLQ YLAVPIYTIF KNLTIILIAY GEVLFFGGKV TSMELTSFIM MVLSSVVATW 60
61 GDQQAIAIKA S
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.783 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.773 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.679 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.643 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.631 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.612 | N/A | N/A | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.609 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.599 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.591 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.586 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.559 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.555 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.524 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.522 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.487 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.479 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.436 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.431 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.411 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.410 | N/A | N/A | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.406 | N/A | N/A | a.2.9 | C-terminal UvrC-binding domain of UvrB |
| View | Download | 0.405 | N/A | N/A | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.399 | N/A | N/A | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.399 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.394 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.377 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.369 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.363 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.360 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.358 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.353 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.348 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.346 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.338 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.328 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.325 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.318 | N/A | N/A | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.318 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.313 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.310 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.302 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.297 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.297 | N/A | N/A | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.296 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.292 | N/A | N/A | g.2.2 | Neurotoxin B-IV |
| View | Download | 0.284 | N/A | N/A | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.281 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.281 | N/A | N/A | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.280 | N/A | N/A | a.135.1 | Tetraspanin |
| View | Download | 0.277 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.272 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.270 | N/A | N/A | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.270 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.265 | N/A | N/A | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.261 | N/A | N/A | d.58.49 | YajQ-like |
| View | Download | 0.258 | N/A | N/A | d.29.1 | Ribosomal protein L31e |
| View | Download | 0.252 | N/A | N/A | d.129.2 | Phosphoglucomutase, C-terminal domain |
| View | Download | 0.250 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.249 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.249 | N/A | N/A | d.192.1 | YlxR-like |
| View | Download | 0.248 | N/A | N/A | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.247 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.244 | N/A | N/A | f.28.1 | Nonheme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.244 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.243 | N/A | N/A | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.242 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.240 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.239 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.232 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.225 | N/A | N/A | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.225 | N/A | N/A | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.221 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.219 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.216 | N/A | N/A | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.214 | N/A | N/A | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.212 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.211 | N/A | N/A | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.204 | N/A | N/A | a.140.1 | LEM domain |
| View | Download | 0.203 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.203 | N/A | N/A | a.118.1 | ARM repeat |
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Region A: Residues: [72-249] |
1 11 21 31 41 51
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1 SLEDLDQELV ESTIFVLNPG YLWMFTNCIS SALFVLIMRK RIRLTNFKDY DTMFYNNVLA 60
61 LPLLLVFSFI MEDWSTKNLS VNLSADSLAA MVISGLMSVG ISYCSGWCVR VTSSTTYSMV 120
121 GALNKLPIAL AGLVFFDAPK NFLSFFSIFL GFLSGLLYAV AKQKKIQQQK VLAATLEK
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
