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View Structure Prediction Details

Protein: MNN1
Organism: Saccharomyces cerevisiae
Length: 762 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MNN1.

Description E-value Query
Range
Subject
Range
gi|437726 - gi|437726|gb|AAA53676.1| MNN1 [Saccharomyces cerevisiae]
0.0 [1..762] [1..762]
gi|1658377 - gi|1658377|gb|AAB18320.1| unknown [Pichia pastoris]
8.0E-51 [270..467] [97..276]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALRRFILN QRSLRSCTIP ILVGALIIIL VLFQLVTHRN DALIRSSNVN STNKKTLKDA  60
   61 DPKVLIEAFG SPEVDPVDTI PVSPLELVPF YDQSIDTKRS SSWLINKKGY YKHFNELSLT 120
  121 DRCKFYFRTL YTLDDEWTNS VKKLEYSIND NEGVDEGKDA NGNPMDEKSE RLYRRKYDMF 180
  181 QAFERIRAYD RCFMQANPVN IQEIFPKSDK MSKERVQSKL IKTLNATFPN YDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [234-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNFKKYDQFE FEHKMFPFIN NFTTETFHEM VPKITSPFGK VLEQGFLPKF DHKTGKVQEY  60
   61 FKYEYDPSKT FWANWRDMSA KVAGRGIVLS LGSNQFPLAV KFIASLRFEG NTLPIQVVYR 120
  121 GDELSQELVD KLIYAARSPD FKPVENNYDN STNVPQEIWF LDVSNTIHPK WRGDFGSYKS 180
  181 KWLVVLLNLL QEFVFLDIDA ISYEKIDNYF KTTEYQKTGT VFYRERALRE NVNERCIARY 240
  241 ETLLPRNLES KNFQNSLLID PDHALNECDN TLTTEEYIFK AFFHHRRQHQ LEAGLFAVDK 300
  301 SKHTIPLVLA AMIHLAKNTA HCTHGDKENF WLGFLAAGHT YALQGVYSGA IGDYVKKTDL 360
  361 NGKRQEAAVE ICSGQIAHMS TDKKTLLWVN GGGTFCKHDN AAKDDWKKDG DFKKFKDQFK 420
  421 TFEEMEKYYY ITPISSKYVI LPDPKSDDWH RASAGACGGY IWCATHKTLL KPYSYNHRTT 480
  481 HGELITLDEE QRLHIDAVNT VWSHANKDNT RSFTEEEIKE LENSRHEQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [302-762]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTFWANWRDM SAKVAGRGIV LSLGSNQFPL AVKFIASLRF EGNTLPIQVV YRGDELSQEL  60
   61 VDKLIYAARS PDFKPVENNY DNSTNVPQEI WFLDVSNTIH PKWRGDFGSY KSKWLVVLLN 120
  121 LLQEFVFLDI DAISYEKIDN YFKTTEYQKT GTVFYRERAL RENVNERCIA RYETLLPRNL 180
  181 ESKNFQNSLL IDPDHALNEC DNTLTTEEYI FKAFFHHRRQ HQLEAGLFAV DKSKHTIPLV 240
  241 LAAMIHLAKN TAHCTHGDKE NFWLGFLAAG HTYALQGVYS GAIGDYVKKT DLNGKRQEAA 300
  301 VEICSGQIAH MSTDKKTLLW VNGGGTFCKH DNAAKDDWKK DGDFKKFKDQ FKTFEEMEKY 360
  361 YYITPISSKY VILPDPKSDD WHRASAGACG GYIWCATHKT LLKPYSYNHR TTHGELITLD 420
  421 EEQRLHIDAV NTVWSHANKD NTRSFTEEEI KELENSRHEQ S

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.51
Match: 1zcuA
Description: apo form of the 162S mutant of glycogenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
mannosyltransferase activity 5.1732667004955 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 4.02812104984198 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 4.02134669395634 bayes_pls_golite062009
UDP-glycosyltransferase activity 3.59185576348855 bayes_pls_golite062009
alpha-1,2-mannosyltransferase activity 3.3757785630345 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 2.9474291454591 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 2.69652752452892 bayes_pls_golite062009
transferase activity 2.3313878748424 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.79751747857925 bayes_pls_golite062009
catalytic activity 1.73979371332125 bayes_pls_golite062009
binding 1.28147782130114 bayes_pls_golite062009
nucleotidyltransferase activity 0.778320684712752 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle