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View Structure Prediction Details

Protein: RMD6
Organism: Saccharomyces cerevisiae
Length: 231 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RMD6.

Description E-value Query
Range
Subject
Range
RMD6 - Protein required for sporulation
RMD6_YEAST - Sporulation protein RMD6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD6 PE=4 SV=1
0.0 [1..231] [1..231]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACPCNIVI LPVEILKNSS KDTKYSLYTT INRGYDVPRL KYGIIVSPRV HSLETLFSDL  60
   61 GFDKNIEKSS LYLLLNDPTL AYPNFHEHFE QLKGETNKDL SLPTYYIPKV QFLTEAFDSE 120
  121 HTLATIGYKP NNKESYEITG FTSMGNGYGI KLFNYSVIHM MRSHKCKRVV ADIIMEHDLL 180
  181 GYYEKKLGFV EVQRFKVLKE QHQVKVFDDK VDFTKDFHVI KMIKELGNHR L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle