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View Structure Prediction Details

Protein: UTR2
Organism: Saccharomyces cerevisiae
Length: 467 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTR2.

Description E-value Query
Range		 Subject
Range
CRH2_YEAST - Probable glycosidase CRH2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTR2 PE=1 SV=3
UTR2 - Chitin transglycosylase that functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans ...
 6.0E-82 [1..350] [1..350]
XTH25_ARATH - Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 ...
 7.0E-69 [72..344] [13..272]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 1.0E-68 [72..344] [6..265]
gi|8886865 - gi|8886865|gb|AAF80590.1|AF223419_1 xyloglucan endotransglycosylase XET1 [Asparagus officinalis]
 5.0E-68 [90..342] [25..269]
gi|3986172 - gi|3986172|dbj|BAA34946.1| EXGT1 [Pisum sativum]
 4.0E-67 [49..344] [2..278]
gi|3043422 - gi|3043422|emb|CAA06217.1| xyloglucan endotransglucosylase/hydrolase [Cicer arietinum]
 1.0E-66 [51..344] [6..280]

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Predicted Domain #1
Region A:
Residues: [1-124] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVNSWLIC LVSIFSFVVR VEAATFCNAT QACPEDKPCC SQYGECGTGQ YCLNNCDVRY  60
   61 SFSHDSCMPV PICKSSSTKF KDYSSKLGNA NTFLGNVSEA DWLYTGDVLD YDDEESLILA 120
  121 MPKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 160.211549
Match: 1gbg__
Description: Bacillus 1-3,1-4-beta-glucanase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [125-307] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGGTVLSSTR AVWYGKVSAR IKTSHLAGVV TGFILYSGAG DELDYEFVGA DLETAQTNFY  60
   61 WESVLNYTNS ANISTTDTFE NYHTYELDWH EDYVTWSIDG VVGRTLYKNE TYNATTQKYQ 120
  121 YPQTPSKVDI SIWPGGNSTN APGTIAWSGG EINWDASDIS NPGYYYAIVN EVNITCYDPP 180
  181 SDT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.156545
Match: 1axkA_
Description: Bacillus 1-3,1-4-beta-glucanase; Xylanase II
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.82375683349763 bayes_pls_golite062009
protein binding 0.964880666937228 bayes_pls_golite062009
cytoskeletal protein binding 0.788546530003802 bayes_pls_golite062009
carbohydrate binding 0.554390015996337 bayes_pls_golite062009
actin binding 0.12129959764441 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [308-467] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKNGTSAYVY TSSSEFLAKD IAITDDEVMM DSDEGSGLDP HKGATTSSTQ KSSSSTATSS  60
   61 SKTSSDHSSS TKKSSKTSST ASSSSSSSSS SSSSSSTATK NGDKVVSSVS SSVTSQTQTT 120
  121 SSVSGSASSS TSSMSGNNAG ANVAANWRLT VLCVILGYVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.156545
Match: 1axkA_
Description: Bacillus 1-3,1-4-beta-glucanase; Xylanase II
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle