YRC Public Data Repository - Protein Structure Prediction

Protein:	UTR5
Organism:	Saccharomyces cerevisiae
Length:	166 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTR5.

Description	E-value	Query Range	Subject Range
UTR5_YEAST - Protein UTR5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTR5 PE=2 SV=1 UTR5 - Protein of unknown function; transcription may be regulated by Gcr1p; essential for growth under sta... gi\|190405531 - gi\|190405531\|gb\|EDV08798.1\| hypothetical protein SCRG_04435 [Saccharomyces cerevisiae RM11-1a]	2.0E-91	[1..166]	[1..166]

Back

Predicted Domain #1

Region A:
Residues: [1-166]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRYGKNLVH YIIVEHDDQR GQKPIDDDDE KNFYYHCSFT FETFFRATAF LLAPAVCAVR  60
   61 EVPCRLTRTR YNATEYIEGY GWMISLQQGL GVAEFYRPWP LSVQLQRYTT PSRRSRFAVL 120
  121 TPQRKCHQNE ANGQDLSLLI LLSRIYPLCS NTSQTRRVAA RKGKLS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits