| Protein: | GCN4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 281 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCN4.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-46 | [1..281] | [1..281] |
|
|
3.0E-26 | [46..279] | [119..328] |
|
|
4.0E-25 | [46..279] | [117..327] |
|
|
5.0E-24 | [40..281] | [10..246] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MSEYQPSLFA LNPMGFSPLD GSKSTNENVS ASTSTAKPMV GQLIFDKFIK TEEDPIIKQD 60
61 TPSNLDFDFA LPQTATAPDA KTVLPIPELD DAVVESFFSS STDSTPMFEY ENLEDNSKEW 120
121 TSLFDNDIPV TTDDVSLADK AIESTEEVSL VPSNLEVSTT SFLPTPVLED AKLTQTRKVK 180
181 KPNSVVKKSH HVGKDDESR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [200-281] |
1 11 21 31 41 51
| | | | | |
1 LDHLGVVAYN RKQRSIPLSP IVPESSDPAA LKRARNTEAA RRSRARKLQR MKQLEDKVEE 60
61 LLSKNYHLEN EVARLKKLVG ER
|
| Detection Method: | |
| Confidence: | 256.9794 |
| Match: | 2dgcA_ |
| Description: | GCN4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [220-281] |
1 11 21 31 41 51
| | | | | |
1 IVPESSDPAA LKRARNTEAA RRSRARKLQR MKQLEDKVEE LLSKNYHLEN EVARLKKLVG 60
61 ER
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 2dgcA |
| Description: | GCN4 |
| Matching Structure (courtesy of the PDB): |
|
