YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: IRC22
Organism: Saccharomyces cerevisiae
Length: 225 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC22.

Description E-value Query
Range
Subject
Range
IRC22_YEAS8 - Increased recombination centers protein 22 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise...
IRC22_YEAS7 - Increased recombination centers protein 22 OS=Saccharomyces cerevisiae (strain YJM789) GN=IRC22 PE=3...
IRC22_YEAS2 - Increased recombination centers protein 22 OS=Saccharomyces cerevisiae (strain JAY291) GN=IRC22 PE=3...
IRC22_YEAS1 - Increased recombination centers protein 22 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=IRC22 PE=...
IRC22 - Putative protein of unknown function; green fluorescent protein (GFP)-fusion localizes to the ER; YE...
IRC22_YEAST - Increased recombination centers protein 22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...
0.0 [1..225] [1..225]

Back

Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFSMLIGFN LLTALSSFCA AISANNSDNV EHEQEVAEAV APPSINIEVK YDVVGKESEN  60
   61 HDSFLEFYAE DTATLAYNVT NWEDTNITIF GVNGTIVTYP HGYPVADITG ASIGPYEMEV 120
  121 NGTSKFGQDV TLNLPEGQYF LIPFLLASRF DEIVRIAAPP TLFEIVSPPI SFFNPQFLSV 180
  181 QVIFLAIIGG VSYYYMKSKT NQRPSKKSAT VKKVDESWLP ETYKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle