| Protein: | FIT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 528 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIT1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-54 | [2..526] | [1808..2346] |
|
|
2.0E-49 | [1..524] | [588..1124] |
|
|
6.0E-41 | [5..526] | [15..521] |
|
Region A: Residues: [1-259] |
1 11 21 31 41 51
| | | | | |
1 MKLSSAFVLS AITVAALGES ITTTITATKN GHVYTKTVTQ DATFVWAGEG AAVTSAVTEA 60
61 STVAATSAAA ETSVAAETSI VEPSTSAQGT SADEGSGSSI TTTITATKNG HVYTKTVTQD 120
121 ATFVWTGEGE RAPASTVATV ETSVAAETSV AEPSTSAQGT SADEGSGSSI TTTITATKNG 180
181 HVYTKTVTQD ATFVWTGEGE RAPVSTVATV ETAASPVTSV AEPSASTDEG SGSSITTTIT 240
241 ATKNGHVYTK TVTQDATFV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [260-528] |
1 11 21 31 41 51
| | | | | |
1 WTGEGERAPA STVATSSISA IEIPSTTEAS IVEASSAVET SSAAETSSAV ETSSAVETSS 60
61 AVETSSAAET SSAAETSSAV ETSSAVEISS AVETSAVETS SSSSTIETTS VKSLSPTQTS 120
121 LSSSVQASSP IETSSAAKTS SVVPTFSSTT TENSSNSKST SAVVASTTTS SESSATIVTP 180
181 TRIGQAYTES SSRDAQSVRT HESNNWSSSS SASTKMVSSI TRVQTTTAGI FTNGKSSTTP 240
241 QIVNYTGAAD SIAAGTGLMG AALAAVIFL
|
| Detection Method: | |
| Confidence: | 13.13 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [297-528] |
1 11 21 31 41 51
| | | | | |
1 VETSSAAETS SAVETSSAVE TSSAVETSSA AETSSAAETS SAVETSSAVE ISSAVETSAV 60
61 ETSSSSSTIE TTSVKSLSPT QTSLSSSVQA SSPIETSSAA KTSSVVPTFS STTTENSSNS 120
121 KSTSAVVAST TTSSESSATI VTPTRIGQAY TESSSRDAQS VRTHESNNWS SSSSASTKMV 180
181 SSITRVQTTT AGIFTNGKSS TTPQIVNYTG AADSIAAGTG LMGAALAAVI FL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
