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View Structure Prediction Details

Protein: API2
Organism: Saccharomyces cerevisiae
Length: 109 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for API2.

Predicted Domain #1
Region A:
Residues: [1-109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKIKNFSS SLYMRRKARK TTAMTHSTIS HVTNVKKAMI FFLLSFSHFS SGYSACKKKR  60
   61 RGSGLRYFGN KLWRPTPRSG QSGQSRPKTG PHGSQRVVFL ELKKAQRWA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.481 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.481 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.443 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.441 d.64.2 Description not found.
View Download 0.437 a.47.2 t-snare proteins
View Download 0.437 a.47.2 t-snare proteins
View Download 0.430 a.24.29 Description not found.
View Download 0.380 a.24.9 alpha-catenin/vinculin
View Download 0.380 a.7.6 Ribosomal protein S20


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle