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View Structure Prediction Details

Protein: YDR514C
Organism: Saccharomyces cerevisiae
Length: 483 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR514C.

Description E-value Query
Range
Subject
Range
YD514_YEAST - Uncharacterized protein YDR514C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR514C ...
YDR514C - Putative protein of unknown function
0.0 [1..483] [1..483]
SPAC2C4.08 - conserved fungal protein
YEY8_SCHPO - Uncharacterized nucleolar protein C2C4.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=...
9.0E-58 [204..388] [73..227]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTKCKKA YEAVVKMVTH RFNSKAVRNY HQPQGLNRSL ATRNAARVRG MVPSRRGGVG  60
   61 LYKSSSSKLM NKLGRQKTWI NEFEHFNSLH EIAYTPNIAL SSEIQKYLKA LETNYRSIYE 120
  121 KSSELLDKKL EEIDKKWIEK NG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CIPDASKDDV EKNLRKQYLA DVQDVKNEHI PVMNCEPGGS QFKYLCKTIE LLSSNKTICF  60
   61 AIDVEAFEFD TDIVTEIGIA IYDPRENIYS LMPIIRSYHL IVAEALPLRN KKFVCDFKDC 120
  121 FLLGESLVLP LEQCVEFIQS LINFYMKCET DQDTTWERAF VGHAIAGDIK WLKKIGVHVP 180
  181 ELDNELTKPE DSTESKGVRK HVKMLDTEKI YSMCYGKKGS SLGKLLRLFH LPHAFLHNAG 240
  241 NDAYYTLLLM LKLGDYNFRK QIGADDLETM GYRIREWFKR EAD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [426-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPKILPMSYV LSVMNANNSK PKVDDKGRKK PRDLVPQTEF SGSHWFQNAR AAFKSTLV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle