YRC Public Data Repository - Protein Structure Prediction

Protein:	ACN9
Organism:	Saccharomyces cerevisiae
Length:	133 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACN9.

Description	E-value	Query Range	Subject Range
gi\|881373 - gi\|881373\|gb\|AAB01676.1\| ORF; Method: conceptual translation supplied by author	217.0	[0..1]	[133..1]
gi\|17221344 - gi\|17221344\|emb\|CAC85376.1\| hypothetical protein [Kluyveromyces lactis]	167.0	[0..3]	[115..4]
SDHF3_KLULA - Succinate dehydrogenase assembly factor 3, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 /... ACN9_KLULA - Acetate non-utilizing protein 9, mitochondrial OS=Kluyveromyces lactis GN=ACN9 PE=3 SV=1	166.0	[0..3]	[115..4]
SDHF3_CANGA - Succinate dehydrogenase assembly factor 3, mitochondrial OS=Candida glabrata (strain ATCC 2001 / CBS... ACN9_CANGA - Acetate non-utilizing protein 9, mitochondrial OS=Candida glabrata GN=ACN9 PE=3 SV=1	157.0	[0..11]	[125..13]
CE23682 - status:Confirmed UniProt:P91989 protein_id:CAB02994.2	157.0	[0..10]	[132..1]
SDHF3_ASHGO - Succinate dehydrogenase assembly factor 3, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS... ACN9_ASHGO - Acetate non-utilizing protein 9, mitochondrial OS=Ashbya gossypii GN=ACN9 PE=3 SV=1	151.0	[0..3]	[116..5]
gi\|39592968, gi\|... - gi\|39592968\|emb\|CAE62582.1\| Hypothetical protein CBG06696 [Caenorhabditis briggsae], gi\|187034242\|em...	144.0	[0..10]	[132..1]
SDHF3_SCHPO - Succinate dehydrogenase assembly factor 3, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ... SPBP23A10.03c - ACN9 family mitochondrial protein	133.0	[0..15]	[114..9]
ACN9 - ACN9 homolog (S. cerevisiae)	132.0	[0..24]	[128..10]
ACN9_NEUCR - Acetate non-utilizing protein 9, mitochondrial OS=Neurospora crassa GN=acn-9 PE=3 SV=1 SDHF3_NEUCR - Succinate dehydrogenase assembly factor 3, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 7...	132.0	[0..19]	[123..32]

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Predicted Domain #1

Region A:
Residues: [1-133]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNKLIYRSV RFATHNSQLL LPPLVLYRRI LRQHKLLPGP QREMGDQYVR NEFKLHKDID  60
   61 NPLHIVGFLA SWQDYLHMIS NGKWKDATLS SETLEKLSPE QTVQLYELMK ETQKLHQDNE 120
  121 IESSKDVKRN NKD

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	62.552842
Match:	PF05882.4
Description:	No description for PF05882.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.874	N/A	N/A	d.14.1	Ribosomal protein S5 domain 2-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits