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View Structure Prediction Details

Protein: SPG3
Organism: Saccharomyces cerevisiae
Length: 127 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SPG3.

Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICYFLVVTI NFLKEKTTIC HYFVNIFSLF LFLFVFVFVF IFVYFFYVIL FYRFCSLFTY  60
   61 FPANSIWYYL SIINIFFPLC FFLYENFTGR NRRKCSLFCL TLIKITYTSP NHGFMVTGKE 120
  121 KFEKLRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.929 a.24.18 Description not found.
View Download 0.900 a.24.14 FAT domain of focal adhesion kinase
View Download 0.900 a.24.14 FAT domain of focal adhesion kinase
View Download 0.868 a.29.15 Description not found.
View Download 0.854 a.2.7 tRNA-binding arm
View Download 0.854 a.2.7 tRNA-binding arm
View Download 0.830 a.24.24 Description not found.
View Download 0.819 a.7.4 Smac/diablo
View Download 0.809 f.18.1 F1F0 ATP synthase subunit A
View Download 0.803 a.45.1 Glutathione S-transferase (GST), C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle