| Protein: | PEX29 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 554 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX29.
| Description | E-value | Query Range |
Subject Range |
|
|
564.0 | [0..1] | [530..1] |
|
|
551.0 | [0..71] | [429..152] |
|
|
430.0 | [0..71] | [552..16] |
|
|
403.0 | [0..51] | [510..2] |
|
|
264.0 | [0..1] | [470..1] |
|
|
214.0 | [0..34] | [449..26] |
|
|
210.0 | [0..44] | [449..18] |
|
Region A: Residues: [1-496] |
1 11 21 31 41 51
| | | | | |
1 MDSVTNFFWN DTYNAGTPTR STLKGKKVQN GIDGKSQAKK ESISSGSRTS DPTRGSLPSS 60
61 SGQPTSGGGF PSTSNIQKMM ADTLVEKIIK MALPPSSKTA VDTIHHRMVA GKERPKLSVQ 120
121 ITSRNFIQMN SRLGVPFMIM DELIKILNWT NPAYTVSIMF LYTLIILKPF QMLSSLPIFY 180
181 LLFCVMVPQY LYIHKPNPTS YLDNNQTPAQ GPPLRRPEVP KPVPELSQEF VLNLTDLQNH 240
241 MLLYVKFYDF TLLILQKFAF FTNEAISSFY FIVLLIIATL NFLYMDKFIK LIPMRPVLIL 300
301 LGWGFFIASH PSNREYLLTK LNSEETRLKT LTISTNLESK ILQHLKLIEA REHRLVMIFE 360
361 IQKYLPEYKE WRPVGFSDDD YSLFSSLRIY QRRIEENSVK SLEEIEPPKD WEWEANSHWV 420
421 LDLDPKEWVE DEFIQYVEID SETKWVYDLN LDGQRGSYRR RMWTNSCVRK KLDSGISSNL 480
481 GEEEVVNPLR EETYRQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [497-554] |
1 11 21 31 41 51
| | | | | |
1 GVHGVTKGSM SGGLTHSSDD DRADEESING TIPNLNNIDA DASYPSIEEL TDTLNSTI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.489 | a.4.1 | Homeodomain-like |
| View | Download | 0.489 | a.4.1 | Homeodomain-like |
| View | Download | 0.467 | a.272.1 | Description not found. |
| View | Download | 0.451 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.451 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.420 | a.17.1 | p8-MTCP1 |
| View | Download | 0.420 | a.8.5 | Description not found. |
| View | Download | 0.341 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.329 | a.60.1 | SAM/Pointed domain |
