| Protein: | PRP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 469 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..469] | [1..469] |
|
|
0.0 | [21..469] | [167..587] |
|
|
0.0 | [37..469] | [131..537] |
|
|
0.0 | [38..466] | [207..604] |
|
|
0.0 | [13..467] | [248..673] |
|
|
0.0 | [13..467] | [248..673] |
|
|
0.0 | [21..467] | [347..780] |
|
|
0.0 | [59..468] | [98..483] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MPPRNTYEKG NPKRQNSPYY KPSFLRREET TNDEEKFQGH GLKTELHSAL KSSNLNLIRR 60
61 TYQTGENPYL SDPHDRGSSS RFNRRYERGL KFYQKGEISK RIAQERTLQK QQEEEELKRK 120
121 LKQEEDEKDK RKLIESGDLP NLELHEDKFL LDLSKFKIYY DNNHGYEWWD TAYLDEKG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [179-351] |
1 11 21 31 41 51
| | | | | |
1 ELMEKYDMNG TSPAEEKLAE DIDEVDDDDD DEHPSIRYVA HPLPEKINEA KVSIKAYLTQ 60
61 HERKRLRRNR RKMAREAREI KIKLGLLPKP EPKVKLSNMM SVFENDQNIT DPTAWEKVVK 120
121 DQVDLRKRKH LEENERRHED AIKRRKEAVN MNVEKPTVYH CKVFQFKNLQ NPK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [352-469] |
1 11 21 31 41 51
| | | | | |
1 IRFKLKMNSK ELSLKGLCLR IRDDGPGIII VVGNEKSCKF YENLVMKRIK WNEDFELHTN 60
61 TGDIKMDMHN NSISKTWEGY LQDCKFKGWF MKVCNDQDSL LRTLGQFDSE HFYSPVQT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.518 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.459 | b.50.1 | Acid proteases |
| View | Download | 0.453 | d.15.1 | Ubiquitin-like |
| View | Download | 0.422 | c.55.3 | Ribonuclease H-like |
| View | Download | 0.429 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.412 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.396 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.387 | d.13.1 | HIT-like |
| View | Download | 0.366 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.365 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.365 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.362 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.346 | d.15.11 | Doublecortin (DC) |
| View | Download | 0.338 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.327 | d.42.1 | POZ domain |
| View | Download | 0.296 | b.55.1 | PH domain-like |
| View | Download | 0.286 | d.58.2 | Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain |
| View | Download | 0.283 | d.89.1 | Origin of replication-binding domain, RBD-like |
| View | Download | 0.274 | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.271 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.261 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.250 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.247 | d.34.1 | DNA-binding domain of Mlu1-box binding protein MBP1 |
| View | Download | 0.240 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.236 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.234 | a.1.1 | Globin-like |
| View | Download | 0.232 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.226 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.218 | d.15.1 | Ubiquitin-like |
| View | Download | 0.216 | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.210 | d.58.3 | Protease propeptides/inhibitors |
