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View Structure Prediction Details

Protein: SDC1
Organism: Saccharomyces cerevisiae
Length: 175 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SDC1.

Description E-value Query
Range
Subject
Range
gi|207346247 - gi|207346247|gb|EDZ72800.1| YDR469Wp-like protein [Saccharomyces cerevisiae AWRI1631]
SDC1 - Subunit of the COMPASS (Set1C) complex, which methylates lysine 4 of histone H3 and is required in c...
gi|190404608 - gi|190404608|gb|EDV07875.1| compass component [Saccharomyces cerevisiae RM11-1a]
gi|151942433 - gi|151942433|gb|EDN60789.1| COMPASS (complex proteins associated with Set1p) component [Saccharomyce...
SDC1_YEAST - COMPASS component SDC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDC1 PE=1 SV=1
7.0E-56 [1..175] [1..175]
gi|14578322 - gi|14578322|gb|AAF99488.1| PV1H14210_P [Plasmodium vivax]
9.0E-36 [42..161] [721..866]
gi|23957728, gi|... - gi|23957728|ref|NP_473185.2| hypothetical protein [Plasmodium falciparum 3D7], gi|15375380|emb|CAB39...
2.0E-35 [42..172] [937..1104]
KAD7_MOUSE - Adenylate kinase 7 OS=Mus musculus GN=Ak7 PE=1 SV=1
5.0E-30 [68..160] [525..609]
gi|22748715, gi|... - gi|22748715|ref|NP_689540.1| adenylate kinase 7 [Homo sapiens], gi|16553126|dbj|BAB71480.1| unnamed ...
1.0E-24 [68..160] [634..718]
gi|15208111 - gi|15208111|dbj|BAB63080.1| hypothetical protein [Macaca fascicularis]
1.0E-24 [68..160] [439..523]
FBpp0305197, Dpy... - The gene Dpy-30-like 2 is referred to in FlyBase by the symbol Dmel\Dpy-30L2 (CG11591, FBgn0035491)....
gi|220951736 - gi|220951736|gb|ACL88411.1| CG11591-PA [synthetic construct]
5.0E-21 [112..172] [38..98]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNESENSPQH NEVTVPMVED TSSNADIPME QIQREDNKNY DKHDNECFDM NGNHNNNSDN  60
   61 LQFDSVPSSA TKDLKNIKSV TNQNVKIEES SSTNSVIEES SEPKISKLEN VNLAATVGGS 120
  121 QTRKYLNTNV TPHLLAGMRL IAVQQPEDPL RVLGEYLIEQ SNILKSGEKE SNASK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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