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View Structure Prediction Details

Protein: YDR442W
Organism: Saccharomyces cerevisiae
Length: 130 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDR442W.

Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKTLPEKV YLSERIIDEE VAVCTVAAEV LAIFTLVCTR VFIIFFTARI CHGIWPSSPS  60
   61 ERPYHTFRAA RLRNSSKMVS SNCVLSECGQ FKRLTANLSQ TVSPSHFLNL IKAPLLIAQR 120
  121 CCECASGNGC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.702 a.7.4 Smac/diablo
View Download 0.702 a.7.4 Smac/diablo
View Download 0.701 a.47.1 STAT
View Download 0.658 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.548 a.7.5 Tubulin chaperone cofactor A
View Download 0.548 a.7.5 Tubulin chaperone cofactor A
View Download 0.517 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.517 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.476 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.437 a.7.5 Tubulin chaperone cofactor A


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle