| Protein: | ERD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 362 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERD1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [5..355] | [467..814] |
|
|
2.0E-87 | [1..362] | [1..362] |
|
|
6.0E-82 | [15..355] | [264..616] |
|
|
1.0E-81 | [15..355] | [264..616] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MEKSESNSEG LYLQNILNVP PPQRFIVLII LALWIWTWIL KFFLHSNLDV SQVILTRVPH 60
61 DIRPGYTLQQ LHRTARNFAL KITRIIIPFH FATVFLFEFM NIIEGPLKNI ILIVYFLPLI 120
121 QCVTIFWFLL KECQIIKYCT RRCLLIESSP RS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.700 | a.47.2 | t-snare proteins |
| View | Download | 0.463 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.745 | a.7.4 | Smac/diablo |
| View | Download | 0.444 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.745 | a.7.4 | Smac/diablo |
| View | Download | 0.700 | a.47.2 | t-snare proteins |
| View | Download | 0.463 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.454 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.444 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.364 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.360 | a.7.8 | GAT domain |
| View | Download | 0.350 | a.47.2 | t-snare proteins |
| View | Download | 0.345 | a.47.2 | t-snare proteins |
| View | Download | 0.320 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.318 | a.7.4 | Smac/diablo |
| View | Download | 0.287 | a.7.7 | BAG domain |
| View | Download | 0.275 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.269 | a.63.1 | Apolipophorin-III |
| View | Download | 0.260 | a.29.2 | Bromodomain |
| View | Download | 0.259 | a.25.1 | Ferritin-like |
| View | Download | 0.250 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.247 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.244 | d.125.1 | Ornithine decarboxylase C-terminal domain |
| View | Download | 0.240 | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.228 | a.47.2 | t-snare proteins |
| View | Download | 0.227 | a.63.1 | Apolipophorin-III |
| View | Download | 0.224 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.224 | a.26.1 | 4-helical cytokines |
| View | Download | 0.218 | a.63.1 | Apolipophorin-III |
| View | Download | 0.214 | a.47.2 | t-snare proteins |
| View | Download | 0.208 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.208 | a.25.1 | Ferritin-like |
| View | Download | 0.200 | a.26.1 | 4-helical cytokines |
|
Region A: Residues: [153-362] |
1 11 21 31 41 51
| | | | | |
1 LRNTYILISD TLTSFGKPLI DFTLFTSLIF REPFTHFDLS VALLPVLVRL LQCLREYRLL 60
61 HEATLLFNAL KYSCNLPILF CTWRSRVYEG SINEERLHHV QRWFMLINSS YTLFWDVRMD 120
121 WSLDSLTSLR SRSKSAVTLK KKMYHSAILV DFLLRFWWLW VYLSQNLKLV AADSDYIFFQ 180
181 GEMQYFEVIR RGIWVVFKLD AEYYIKFASK
|
| Detection Method: | |
| Confidence: | 83.823909 |
| Match: | PF03124 |
| Description: | EXS family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
