| Protein: | DFM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 341 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DFM1.
| Description | E-value | Query Range |
Subject Range |
|
|
9.0E-86 | [1..341] | [1..341] |
|
|
2.0E-57 | [23..338] | [15..307] |
|
|
5.0E-57 | [23..338] | [15..315] |
|
|
2.0E-47 | [28..323] | [17..274] |
|
|
2.0E-40 | [27..292] | [10..238] |
|
|
3.0E-39 | [23..281] | [4..234] |
|
|
1.0E-36 | [20..291] | [17..257] |
|
Region A: Residues: [1-267] |
1 11 21 31 41 51
| | | | | |
1 MAGPRNVRTL HGNGGRNNDV MGPKEFWLNI PPITRTLFTL AIVMTIVGRL NLINPWYFIY 60
61 VWNLTFKKVQ IWRLLTSCVM LSSRAMPALM ELYSIYDRSS QLERGHFGPG LSNRRGPMVT 120
121 VDYAYYLCFC ILAITTATTI IYGSYYPVVL TSGFISCITY TWSIDNANVQ IMFYGLIPVW 180
181 GKYFPLIQLF ISFVFNEGDF VISLIGFTTG YLYTCLDTHT LGPIWGMISR KADPTYGISP 240
241 NGKFSTPWWF TSLYARITGA HNETATF
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [268-341] |
1 11 21 31 41 51
| | | | | |
1 NNNFANVPSS QRETRTFSGR GQRLGTAPAT LSQTSGTDSG RASGSQLRSG PSNLNQFQGR 60
61 GQRVGQTNSP SDSQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.310 | a.39.1 | EF-hand |
| View | Download | 0.254 | a.4.1 | Homeodomain-like |
| View | Download | 0.404 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.353 | a.4.7 | Ribosomal protein L11, C-terminal domain |
| View | Download | 0.232 | a.60.5 | Barrier-to-autointegration factor, BAF |
| Term | Confidence | Notes |
| binding | 2.27938828612061 | bayes_pls_golite062009 |
| protein binding | 1.72968950672856 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.172760623576326 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.156922202244152 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.0437862640556833 | bayes_pls_golite062009 |
