| Protein: | UBA2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 636 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBA2.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..636] | [1..636] |
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0.0 | [14..636] | [10..640] |
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0.0 | [14..636] | [10..640] |
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0.0 | [10..633] | [8..636] |
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0.0 | [14..636] | [10..638] |
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0.0 | [13..626] | [17..628] |
|
Region A: Residues: [1-273] |
1 11 21 31 41 51
| | | | | |
1 MPRETSLVTI IGEDSYKKLR SSRCLLVGAG GIGSELLKDI ILMEFGEIHI VDLDTIDLSN 60
61 LNRQFLFRQK DIKQPKSTTA VKAVQHFNNS KLVPYQGNVM DISTFPLHWF EQFDIIFNAL 120
121 DNLAARRYVN KISQFLSLPL IESGTAGFDG YMQPIIPGKT ECFECTKKET PKTFPVCTIR 180
181 STPSQPIHCI VWAKNFLFNQ LFASETSGNE DDNNQDWGTD DAEEIKRIKQ ETNELYELQK 240
241 IIISRDASRI PEILNKLFIQ DINKLLAIEN LWK
|
| Detection Method: |  |
| Confidence: | 165.69897 |
| Match: | 1jw9B_ |
| Description: | Molybdenum cofactor biosynthesis protein MoeB |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [274-330] |
1 11 21 31 41 51
| | | | | |
1 TRTKPVPLSD SQINTPTKTA QSASNSVGTI QEQISNFINI TQKLMDRYPK EQNHIEF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.694 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.578 | a.64.1 | Saposin |
| View | Download | 0.587 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.548 | a.64.1 | Saposin |
| View | Download | 0.369 | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.320 | a.4.1 | Homeodomain-like |
| View | Download | 0.305 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.300 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.300 | a.65.1 | Annexin |
| View | Download | 0.265 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.263 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.252 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.236 | a.4.1 | Homeodomain-like |
| View | Download | 0.233 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.232 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.221 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.220 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.213 | d.58.17 | Metal-binding domain |
| View | Download | 0.211 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.209 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.209 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.207 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.207 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.206 | g.53.1 | TAZ domain |
| View | Download | 0.201 | a.77.1 | DEATH domain |
|
Region A: Residues: [331-506] |
1 11 21 31 41 51
| | | | | |
1 DKDDADTLEF VATAANIRSH IFNIPMKSVF DIKQIAGNII PAIATTNAIV AGASSLISLR 60
61 VLNLLKYAPT TKYTDLNMAF TAKASNLSQN RYLSNPKLAP PNKNCPVCSK VCRGVIKLSS 120
121 DCLNKMKLSD FVVLIREKYS YPQDISLLDA SNQRLLFDYD FEDLNDRTLS EINLGN
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| Detection Method: | |
| Confidence: | 64.853872 |
| Match: | PF02134 |
| Description: | Repeat in ubiquitin-activating (UBA) protein |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [507-636] |
1 11 21 31 41 51
| | | | | |
1 GSIILFSDEE GDTMIRKAIE LFLDVDDELP CNTCSLPDVE VPLIKANNSP SKNEEEEKNE 60
61 KGADVVATTN SHGKDGIVIL DDDEGEITID AEPINGSKKR PVDTEISEAP SNKRTKLVNE 120
121 PTNSDIVELD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.457 | 0.137 | protein sumoylation | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.247 | 0.048 | protein sumoylation | a.118.8 | TPR-like |
| View | Download | 0.231 | 0.014 | protein sumoylation | d.82.2 | Frataxin-like |
