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View Structure Prediction Details

Protein: BCP1
Organism: Saccharomyces cerevisiae
Length: 283 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCP1.

Description E-value Query
Range
Subject
Range
BCP1 - Essential protein involved in nuclear export of Mss4p, which is a lipid kinase that generates phosph...
gi|151942333 - gi|151942333|gb|EDN60689.1| conserved protein [Saccharomyces cerevisiae YJM789]
BCP1_YEAST - Protein BCP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BCP1 PE=1 SV=1
gi|207346395 - gi|207346395|gb|EDZ72904.1| YDR361Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190404704 - gi|190404704|gb|EDV07971.1| hypothetical protein SCRG_00172 [Saccharomyces cerevisiae RM11-1a]
0.0 [1..283] [1..283]
BCP1_SCHPO - Protein bcp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bcp1 PE=2 SV=1
SPCC613.08 - CDK regulator
6.0E-65 [5..256] [37..283]
gi|17861908 - gi|17861908|gb|AAL39431.1| GM14202p [Drosophila melanogaster]
2.0E-58 [11..255] [5..252]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-54 [36..274] [70..296]
BCCIP_ARATH - Protein BCCIP homolog OS=Arabidopsis thaliana GN=At2g44510 PE=1 SV=2
2.0E-52 [36..274] [70..310]
BCCIP_MOUSE - BRCA2 and CDKN1A-interacting protein OS=Mus musculus GN=Bccip PE=1 SV=1
1.0E-51 [14..252] [24..269]
BCCIP - BRCA2 and CDKN1A interacting protein
6.0E-47 [15..252] [23..267]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQAIKLNDL KNRKRKNVEE ENGSDESEID ISSTDSENEE EQNGEEEIVN IDFDFFGGNP  60
   61 EVDFHALKNL LRQLFGPQES T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIQLSSLADL ILGSPTTTIK TDGKESDPYC FLSFVDFKAN HLSDYVKYLQ KVDMRLSTFF  60
   61 KTMIDSGNKN CALVLSERLI NMPPEVVPPL YKITLEDVAT ALGDDKHYDF YIIVTRKYEV 120
  121 NFDTDDDTDS GKRNKNKDER SKKRVKADEV DYFHEEDRFF EKYAKIHFES EAKKGVISSY 180
  181 MILDHEGLVK SIDELETEIS TW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle