Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS28.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..286] | [1..286] |
|
|
4.0E-58 | [17..244] | [22..285] |
|
|
1.0E-39 | [93..238] | [265..413] |
|
|
3.0E-39 | [28..239] | [35..312] |
|
|
6.0E-34 | [116..236] | [70..187] |
|
|
3.0E-29 | [125..236] | [80..188] |
|
|
2.0E-28 | [118..236] | [92..227] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MSIVGRNAIL NLRISLCPLF MGKRSFVSSP VSNSAKAVKF LKAQRRKQKN EAKQATLKAS 60
61 TDKVDPVLGR ADTPFITRIM AELKEPLVLS KGYNIEEVDK FLAAIESAKR ERAELSGLNT 120
121 EVVGIEDIEK LE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.545 | a.39.1 | EF-hand |
| View | Download | 0.304 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.350 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.545 | a.39.1 | EF-hand |
| View | Download | 0.466 | a.39.1 | EF-hand |
| View | Download | 0.376 | a.39.1 | EF-hand |
| View | Download | 0.350 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.330 | a.39.1 | EF-hand |
| View | Download | 0.258 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.246 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.239 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.225 | a.24.3 | Cytochromes |
| View | Download | 0.225 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.222 | a.3.1 | Cytochrome c |
| View | Download | 0.221 | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.219 | b.40.1 | Staphylococcal nuclease |
| View | Download | 0.218 | a.24.1 | Apolipoprotein |
| View | Download | 0.214 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.209 | a.22.1 | Histone-fold |
| View | Download | 0.203 | a.118.8 | TPR-like |
|
Region A: Residues: [133-286] |
1 11 21 31 41 51
| | | | | |
1 DRREAILRIL SMRNSENKNA IKMAVELARK EFERFPGDTG SSEVQAACMT VRIQNMANHI 60
61 KEHRKDFANT RNLRILVQQR QAILRYLKRD NPEKYYWTIQ KLGLNDAAIT DEFNMDRRYM 120
121 QDYEFFGDKI LIRDSKKVAN QKRKEIRKQK RATF
|
| Detection Method: | |
| Confidence: | 134.156545 |
| Match: | 1eg0F_ |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
