Protein: | PEX3 |
Organism: | Saccharomyces cerevisiae |
Length: | 441 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX3.
Description | E-value | Query Range |
Subject Range |
|
455.0 | [0..7] | [433..4] |
|
441.0 | [0..5] | [431..3] |
|
441.0 | [0..5] | [431..3] |
|
424.0 | [0..9] | [431..7] |
|
414.0 | [0..9] | [431..7] |
|
412.0 | [0..9] | [431..7] |
|
405.0 | [0..9] | [431..121] |
|
399.0 | [0..9] | [431..7] |
|
398.0 | [0..9] | [431..7] |
Region A: Residues: [1-121] |
1 11 21 31 41 51 | | | | | | 1 MAPNQRSRSL LQRHRGKVLI SLTGIAALFT TGSVVVFFVK RWLYKQQLRI TEQHFIKEQI 60 61 KRRFEQTQED SLYTIYELLP VWRMVLNEND LNLDSIVTQL KDQKNQLTRA KSSESRESSP 120 121 L |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.906 | c.52.1 | Restriction endonuclease-like |
View | Download | 0.906 | c.52.1 | Restriction endonuclease-like |
View | Download | 0.803 | a.7.6 | Ribosomal protein S20 |
View | Download | 0.797 | d.198.1 | Type III secretory system chaperone |
View | Download | 0.777 | a.7.6 | Ribosomal protein S20 |
View | Download | 0.705 | d.110.7 | Description not found. |
View | Download | 0.686 | a.79.1 | Antitermination factor NusB |
View | Download | 0.663 | d.198.1 | Type III secretory system chaperone |
View | Download | 0.647 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
View | Download | 0.593 | c.52.1 | Restriction endonuclease-like |
Region A: Residues: [122-441] |
1 11 21 31 41 51 | | | | | | 1 KSKAELWNEL ELKSLIKLVT VTYTVSSLIL LTRLQLNILT RNEYLDSAIK LTMQQENCNK 60 61 LQNRFYNWVT SWWSDPEDKA DDAMVMAAKK SKKEGQEVYI NEQAFLSLSW WILNKGWLSY 120 121 NEIITNQIEI EFDGIHPRDT LTLEEFSSRL TNIFRNTNSQ IFQQNNNNLT SILLPKDSSG 180 181 QEFLLSQTLD ADALTSFHSN TLVFNQLVNE LTQCIESTAT SIVLESLINE SFHFIMNKVG 240 241 IKTIAKKKPG QEDQQQYQMA VFAMSMKDCC QEMLQTTAGS SHSGSVNEYL ATLDSVQPLD 300 301 DLSASVYSNF GVSSSFSFKP |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.