| Protein: | PEX3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 441 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX3.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..7] | [433..4] |
|
|
441.0 | [0..5] | [431..3] |
|
|
441.0 | [0..5] | [431..3] |
|
|
424.0 | [0..9] | [431..7] |
|
|
414.0 | [0..9] | [431..7] |
|
|
412.0 | [0..9] | [431..7] |
|
|
405.0 | [0..9] | [431..121] |
|
|
399.0 | [0..9] | [431..7] |
|
|
398.0 | [0..9] | [431..7] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MAPNQRSRSL LQRHRGKVLI SLTGIAALFT TGSVVVFFVK RWLYKQQLRI TEQHFIKEQI 60
61 KRRFEQTQED SLYTIYELLP VWRMVLNEND LNLDSIVTQL KDQKNQLTRA KSSESRESSP 120
121 L
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.906 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.906 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.803 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.797 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.777 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.705 | d.110.7 | Description not found. |
| View | Download | 0.686 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.663 | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.647 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.593 | c.52.1 | Restriction endonuclease-like |
|
Region A: Residues: [122-441] |
1 11 21 31 41 51
| | | | | |
1 KSKAELWNEL ELKSLIKLVT VTYTVSSLIL LTRLQLNILT RNEYLDSAIK LTMQQENCNK 60
61 LQNRFYNWVT SWWSDPEDKA DDAMVMAAKK SKKEGQEVYI NEQAFLSLSW WILNKGWLSY 120
121 NEIITNQIEI EFDGIHPRDT LTLEEFSSRL TNIFRNTNSQ IFQQNNNNLT SILLPKDSSG 180
181 QEFLLSQTLD ADALTSFHSN TLVFNQLVNE LTQCIESTAT SIVLESLINE SFHFIMNKVG 240
241 IKTIAKKKPG QEDQQQYQMA VFAMSMKDCC QEMLQTTAGS SHSGSVNEYL ATLDSVQPLD 300
301 DLSASVYSNF GVSSSFSFKP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
