YRC Public Data Repository - Protein Structure Prediction

Protein:	IPK1
Organism:	Saccharomyces cerevisiae
Length:	281 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPK1.

Description	E-value	Query Range	Subject Range
gi\|151942287 - gi\|151942287\|gb\|EDN60643.1\| inositol 1,3,4,5,6-pentakisphosphate 2-kinase [Saccharomyces cerevisiae ... IPK1 - Inositol 1,3,4,5,6-pentakisphosphate 2-kinase, nuclear protein required for synthesis of 1,2,3,4,5,6... IPK1_YEAST - Inositol-pentakisphosphate 2-kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IPK1...	0.0	[1..281]	[1..281]
ipk1 - inositol 1,3,4,5,6-pentakisphosphate (IP5) kinase IPK1_SCHPO - Inositol-pentakisphosphate 2-kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ipk1 P...	2.0E-74	[4..264]	[393..609]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	3.0E-74	[4..264]	[36..252]

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Predicted Domain #1

Region A:
Residues: [1-281]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVIGRGGAN ILIDYGDPTW LWRCCIRWPD LLSSNNSYTI KNISYIKDYV EPLLHGLLCP  60
   61 MYLIDVDIEA IRPILSDFIL NLDDKVVKVI KIKNLTNNTS NLILNNHFLK SYCSQNLQTV 120
  121 ILELKPKWLY YDTDYCRNCT HNAFKGRGTK YCYNQLLMNP AHLELIFGEC NIFPVKFKDA 180
  181 MHEYLRNDNN IFKILYDLQK KLTKNTTPIS DIKSINDVND EHLLLMTLRD VTCFIEWNSA 240
  241 ENALHVNIID VDLKPKEKWT HWTKTYSQLT SSQKIYHTSN K

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [107-281]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFLKSYCSQN LQTVILELKP KWLYYDTDYC RNCTHNAFKG RGTKYCYNQL LMNPAHLELI  60
   61 FGECNIFPVK FKDAMHEYLR NDNNIFKILY DLQKKLTKNT TPISDIKSIN DVNDEHLLLM 120
  121 TLRDVTCFIE WNSAENALHV NIIDVDLKPK EKWTHWTKTY SQLTSSQKIY HTSNK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits