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View Structure Prediction Details

Protein: GIC2
Organism: Saccharomyces cerevisiae
Length: 383 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIC2.

Description E-value Query
Range
Subject
Range
gi|207346470 - gi|207346470|gb|EDZ72955.1| YDR309Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190404749 - gi|190404749|gb|EDV08016.1| GTPase-interacting component 2 [Saccharomyces cerevisiae RM11-1a]
GIC2 - Redundant rho-like GTPase Cdc42p effector; homolog of Gic1p; involved in initiation of budding and c...
GIC2_YEAST - GTPase-interacting component 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIC2 PE=1...
0.0 [1..383] [1..383]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSASITNTG NETMNLPQMR SIWLDEDEEA EKLYGLQAQQ FMGSDDEENL GITFINSDKP  60
   61 VLSNKKNIEL PPLSPNSHPS CHHRRSNSNS AKSKESSSSS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSANKTNHKK VFLKLNLLKK KLLGAQPDIR GKGISTPFDF QHISHADTRN GFQDEQLQEP  60
   61 SSLSTEIKDD YTSSSSKRDS KSLNKAFVTE RIPANRESKL 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 18.119186
Match: PF00786
Description: P21-Rho-binding domain

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [201-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ISRSHENKTS RLSVARSISV TSSNYSKNTQ GNNHSINGRV VSTSTMATSI FEYSPNASPK  60
   61 QFKNKSHALG HRYTNSTDSS ESSLDFLKNY NFPTLLEDKP ILDFLPRSQR SSAYRSLLET 120
  121 PNSNKDSAKA FFPSRQSPLP KRRNSIATPS PQSKFSYSDS PVNHRKSFDD VLYSFNQLEP 180
  181 LQT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle