YRC Public Data Repository - Protein Structure Prediction

Protein:	DON1
Organism:	Saccharomyces cerevisiae
Length:	365 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DON1.

Description	E-value	Query Range	Subject Range
gi\|51830272 - gi\|51830272\|gb\|AAU09705.1\| YDR273W [Saccharomyces cerevisiae]	637.0	[0..1]	[365..1]
gi\|49528517, gi\|... - gi\|50293585\|ref\|XP_449204.1\| unnamed protein product [Candida glabrata], gi\|49528517\|emb\|CAG62174.1\|... gi\|49528517 - gi\|49528517\|emb\|CAG62174.1\| unnamed protein product [Candida glabrata]	99.0	[0..1]	[139..1]
gi\|50311551, gi\|... - gi\|50311551\|ref\|XP_455800.1\| unnamed protein product [Kluyveromyces lactis], gi\|49644936\|emb\|CAG9850... gi\|49644936 - gi\|49644936\|emb\|CAG98508.1\| KLLA0F15994p [Kluyveromyces lactis]	97.0	[0..7]	[139..13]
gi\|44981524 - gi\|44981524\|gb\|AAS51309.1\| ACR083Cp [Ashbya gossypii ATCC 10895] gi\|44981524, gi\|... - gi\|45185769\|ref\|NP_983485.1\| ACR083Cp [Ashbya gossypii ATCC 10895], gi\|44981524\|gb\|AAS51309.1\| ACR08...	91.0	[0..2]	[164..20]
gi\|85075624 - gi\|85075624\|ref\|XP_955794.1\| hypothetical protein [Neurospora crassa OR74A] gi\|28916807, gi\|... - gi\|32415615\|ref\|XP_328286.1\| hypothetical protein [Neurospora crassa], gi\|28916807\|gb\|EAA26558.1\| hy...	75.0	[0..28]	[329..2]
gi\|50422127, gi\|... - gi\|50422127\|ref\|XP_459626.1\| hypothetical protein DEHA0E07755g [Debaryomyces hansenii CBS767], gi\|49... gi\|49655294 - gi\|49655294\|emb\|CAG87856.1\| DEHA2E07260p [Debaryomyces hansenii]	64.0	[0..3]	[164..65]
gi\|116199543, gi... - gi\|88179206\|gb\|EAQ86674.1\| hypothetical protein CHGG_07927 [Chaetomium globosum CBS 148.51], gi\|1161...	60.0	[0..32]	[163..27]
gi\|46437578, gi\|... - gi\|68480246\|ref\|XP_715932.1\| hypothetical protein CaO19.8078 [Candida albicans SC5314], gi\|46437578\|... orf19.8078 - orf19.448 CGDID:CAL0005703 Assembly 19, Contig19-20052 (73449, 74717) CDS, translated using codon ta...	59.0	[0..26]	[126..64]

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Predicted Domain #1

Region A:
Residues: [1-231]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKNRKGKE NNAAKTSFLK VENIKNTNSG LELPSQDYTN VEEKESSPKT DFPLITKEHV  60
   61 NTKTDSNILD YPTIGDLVSS VEKLCVLKEL KIAFPEVDDT LIKAILIASQ GVLEPAFNSL 120
  121 LYYSSPEENT DFALPMKPIS VEDYSKINVS EILQREIFDD IEDEFSGQGI NGSMVISKIE 180
  181 SELSSLAEHI GNISTPGSNR EVAESTRNVA VAEGHNTILS NEDSILKGKE K

[Run NCBI BLAST on this sequence.]

Detection Method:	ab initio
Confidence:	7.02
Match:
Description:	No description for 1ej6B was found.

Predicted Domain #2

Region A:
Residues: [232-365]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKEEEKEKGE EKGVNSLKGA AVKVVAKSLK NNRIPVTVKR NEPSNNLFDV LNCDESEEEE  60
   61 EQDVETNTSN QERKNQGGNT EVPEAQRDSA DRLPAKDDGG YKSAFGTDSC GLFAADAKDE 120
  121 KKQVHPSRQE LSFT

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.243	c.25.1	Ferredoxin reductase-like, C-terminal NADP-linked domain
View	Download	0.221	c.30.1	PreATP-grasp domain
View	Download	0.217	c.44.1	Phosphotyrosine protein phosphatases I
View	Download	0.206	c.2.1	NAD(P)-binding Rossmann-fold domains

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits