| Protein: | YAP6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 383 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAP6.
| Description | E-value | Query Range |
Subject Range |
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1.0E-43 | [12..378] | [1490..1852] |
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1.0E-43 | [12..378] | [1488..1850] |
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2.0E-43 | [12..378] | [1487..1849] |
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2.0E-43 | [12..378] | [1488..1850] |
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2.0E-43 | [12..378] | [1488..1850] |
|
Region A: Residues: [1-57] |
1 11 21 31 41 51
| | | | | |
1 MQNPPLIRPD MYNQGSSSMA TYNASEKNLN EHPSPQIAQP STSQKLPYRI NPTTTNG
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| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.458 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.316 | a.4.1 | Homeodomain-like |
| View | Download | 0.397 | a.64.1 | Saposin |
| View | Download | 0.335 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.311 | a.65.1 | Annexin |
| View | Download | 0.301 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.282 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.246 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.223 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.200 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
|
Region A: Residues: [58-383] |
1 11 21 31 41 51
| | | | | |
1 DTDISVNSNP IQPPLPNLMH LSGPSDYRSM HQSPIHPSYI IPPHSNERKQ SASYNRPQNA 60
61 HVSIQPSVVF PPKSYSISYA PYQINPPLPN GLPNQSISLN KEYIAEEQLS TLPSRNTSVT 120
121 TAPPSFQNSA DTAKNSADNN DNNDNVTKPV PDKDTQLISS SGKTLRNTRR AAQNRTAQKA 180
181 FRQRKEKYIK NLEQKSKIFD DLLAENNNFK SLNDSLRNDN NILIAQHEAI RNAITMLRSE 240
241 YDVLCNENNM LKNENSIIKN EHNMSRNENE NLKLENKRFH AEYIRMIEDI ENTKRKEQEQ 300
301 RDEIEQLKKK IRSLEEIVGR HSDSAT
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| Detection Method: | |
| Confidence: | 18.045757 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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