YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CTA1
Organism: Saccharomyces cerevisiae
Length: 515 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTA1.

Description E-value Query
Range		 Subject
Range
CATA2_GOSHI - Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1
 0.0 [8..505] [1..490]
CATA3_SOYBN - Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1
 0.0 [8..505] [1..490]
CATA_HELAN - Catalase OS=Helianthus annuus PE=2 SV=1
 0.0 [8..507] [1..492]
gi|6635734 - gi|6635734|gb|AAF19965.1|AF207906_1 catalase 1 [Zantedeschia aethiopica]
 0.0 [8..505] [1..490]
gi|2459684 - gi|2459684|gb|AAB71764.1| catalase 1 [Nicotiana tabacum]
 0.0 [10..505] [5..490]
gi|447739 - gi|447739|prf||1915304A nylB upstream ORF
 0.0 [8..507] [1..492]
CATA1_RICCO - Catalase isozyme 1 OS=Ricinus communis GN=CAT1 PE=2 SV=2
 0.0 [8..505] [1..490]
CATA3_NICPL - Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1
 0.0 [10..505] [5..490]
CATA_BOVIN - Catalase OS=Bos taurus GN=CAT PE=1 SV=3
 0.0 [5..510] [9..505]

Back

Predicted Domain #1
Region A:
Residues: [1-59] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLGQEKNE VNYSDVREDR VVTNSTGNPI NEPFVTQRIG EHGPLLLQDY NLIDSLAHF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11000.0
Match: 1a4eA_
Description: Catalase I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalase activity 8.51144125131094 bayes_pls_golite062009
peroxidase activity 6.21360523181668 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 6.21360523181668 bayes_pls_golite062009
antioxidant activity 6.04714571701065 bayes_pls_golite062009
oxidoreductase activity 4.53518604474275 bayes_pls_golite062009
catalytic activity 2.21594208202467 bayes_pls_golite062009
binding 1.7977175288758 bayes_pls_golite062009
protein binding 1.4378207235312 bayes_pls_golite062009
hydrolase activity 0.904643040470721 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [60-515] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRENIPQRNP HAHGSGAFGY FEVTDDITDI CGSAMFSKIG KRTKCLTRFS TVGGDKGSAD  60
   61 TVRDPRGFAT KFYTEEGNLD WVYNNTPVFF IRDPSKFPHF IHTQKRNPQT NLRDADMFWD 120
  121 FLTTPENQVA IHQVMILFSD RGTPANYRSM HGYSGHTYKW SNKNGDWHYV QVHIKTDQGI 180
  181 KNLTIEEATK IAGSNPDYCQ QDLFEAIQNG NYPSWTVYIQ TMTERDAKKL PFSVFDLTKV 240
  241 WPQGQFPLRR VGKIVLNENP LNFFAQVEQA AFAPSTTVPY QEASADPVLQ ARLFSYADAH 300
  301 RYRLGPNFHQ IPVNCPYASK FFNPAIRDGP MNVNGNFGSE PTYLANDKSY TYIQQDRPIQ 360
  361 QHQEVWNGPA IPYHWATSPG DVDFVQARNL YRVLGKQPGQ QKNLAYNIGI HVEGACPQIQ 420
  421 QRVYDMFARV DKGLSEAIKK VAEAKHASEL SSNSKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11000.0
Match: 1a4eA_
Description: Catalase I
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle