YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: COX20
Organism: Saccharomyces cerevisiae
Length: 205 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COX20.

Description E-value Query
Range
Subject
Range
COX20 - Mitochondrial inner membrane protein, required for proteolytic processing of Cox2p and its assembly ...
COX20_YEAST - Cytochrome c oxidase protein 20, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28...
0.0 [1..205] [1..205]

Back

Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWWPWSNQT EDQKQQQQPQ GKADGDRVLT NYSRGQKILL EDTPPKFADD LSNSQLAKKQ  60
   61 ERATLKEAWD SIRWSDFSLQ KLTSIPCFRD AGMLGFSSMF LMGSIIFIYH KSPTKATNWA 120
  121 MSSLILGSIV GWEQCRLKRQ KSFQIAQLAK ETVAKKEKPM LHNVPHDPSL PGQWEAAKNE 180
  181 KQSQFEQSNQ NLSQASSEKK WYKFW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle