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View Structure Prediction Details

Protein: YDR222W
Organism: Saccharomyces cerevisiae
Length: 415 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR222W.

Description E-value Query
Range
Subject
Range
YDR222W - Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytopla...
YDR22_YEAST - SVF1-like protein YDR222W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR222W PE=1 S...
0.0 [1..415] [1..415]
SVF1_SCHPO - Survival factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=svf1 PE=3 SV=1
SPCC584.11c - Svf1 family protein Svf1
0.0 [71..415] [51..380]

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Predicted Domain #1
Region A:
Residues: [1-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLESSSDKIK FAPIKEVDYK KPVSKSKNYT LINDIQPLEW YCHNDSETGY QHTISNKTDG  60
   61 GRGLFRVMKK SMETRVETQT LYFTDLHTGL CGFVQLLYST VMGGIYKGFQ LNFKVFGSES 120
  121 NNTDYDVWES FKLDDIAEFQ PLKFVSRNVI FEFLSNKNEK LGSIGQLSIK CDLPTCNNTI 180
  181 QNLKIDLLVD LFQGFKMNPN GCNYYFDKQI SMSDEFVSSD KMIRHVFVPR GKCNGNISYD 240
  241 KKLNSGDFQN KNISLTDVPV VYLDAVQGLL PNKAASKWNF LCFQSENYSV LAIEFTTPRD 300
  301 HDNVTVTVWS ITEKNKLISI GSSVQSPKRH VRFRATSTDK ESGWVYPTSI KFPGGFSEHD 360
  361 LRLVNRYDVL GELPSMVRSL AQKIVSIKPF IYQYCQPSKY KHEKGISIVE STFIS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle