| Protein: | COQ4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 335 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COQ4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..335] | [1..335] |
|
|
0.0 | [4..335] | [1..332] |
|
|
1.0E-93 | [70..307] | [33..271] |
|
|
8.0E-86 | [68..305] | [24..258] |
|
|
1.0E-80 | [88..305] | [8..222] |
|
|
3.0E-65 | [76..303] | [5..230] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MLRLSLLRST ATLPVKCQRR GLILPAAAMY TLGSLIFGKE ARLADAMERG ELHNKNVDYA 60
61 KEAEERTELR IRALANTRP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.613 | a.39.1 | EF-hand |
| View | Download | 0.526 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.482 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.604 | a.64.1 | Saposin |
| View | Download | 0.613 | a.39.1 | EF-hand |
| View | Download | 0.604 | a.64.1 | Saposin |
| View | Download | 0.526 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.489 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.489 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.482 | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.468 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.430 | d.45.1 | ClpS-like |
| View | Download | 0.423 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.395 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.386 | a.3.1 | Cytochrome c |
| View | Download | 0.385 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.383 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.382 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.364 | d.45.1 | ClpS-like |
| View | Download | 0.362 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.358 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.357 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.350 | a.3.1 | Cytochrome c |
| View | Download | 0.339 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.324 | a.30.1 | ROP protein |
| View | Download | 0.320 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.314 | a.11.2 | Second domain of FERM |
| View | Download | 0.309 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.298 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.291 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.290 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.286 | a.74.1 | Cyclin-like |
| View | Download | 0.281 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.280 | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.280 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.271 | d.58.17 | Metal-binding domain |
| View | Download | 0.271 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.269 | a.4.1 | Homeodomain-like |
| View | Download | 0.267 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.258 | a.39.1 | EF-hand |
| View | Download | 0.255 | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.254 | a.4.3 | ARID-like |
| View | Download | 0.252 | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.251 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.251 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.246 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.244 | a.4.1 | Homeodomain-like |
| View | Download | 0.244 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.241 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.239 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.236 | a.47.2 | t-snare proteins |
| View | Download | 0.235 | a.21.1 | HMG-box |
| View | Download | 0.223 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.221 | d.130.1 | S-adenosylmethionine synthetase |
| View | Download | 0.220 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.218 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.215 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.212 | a.46.1 | Methionine synthase domain |
| View | Download | 0.211 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.205 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.203 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.203 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.200 | b.40.2 | Bacterial enterotoxins |
|
Region A: Residues: [80-335] |
1 11 21 31 41 51
| | | | | |
1 MEPRYNGHVP LHRYEKLLLF AISGWNSFFH PEDGYNIVQL GEATALPVFL ENLKQTMLSD 60
61 SSGRRILKEQ PNITTEILHM DKLAKLPHNT FGYVYYQWLK RENVSPDTRA PVKFIDDPMH 120
121 AYIFKRYRQC HDFYHAITNM PIIIEGEITI KALEGANLGV PMAILGGILA PLRLKKVQRK 180
181 RLYNIYLPWA VRTGLSCKPL INVYWEEMLE KDVTALRKEL KITLPPDLRT MRKERAALRK 240
241 EIDAKYNSQK RATTPA
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [219-335] |
1 11 21 31 41 51
| | | | | |
1 MPIIIEGEIT IKALEGANLG VPMAILGGIL APLRLKKVQR KRLYNIYLPW AVRTGLSCKP 60
61 LINVYWEEML EKDVTALRKE LKITLPPDLR TMRKERAALR KEIDAKYNSQ KRATTPA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
