Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSS116.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..664] | [1..664] |
|
|
0.0 | [16..514] | [74..577] |
|
|
0.0 | [16..514] | [74..577] |
|
|
0.0 | [16..514] | [74..577] |
|
|
0.0 | [7..530] | [57..583] |
|
|
0.0 | [5..517] | [113..621] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MLTSILIKGR TPVLASRNLL AALSNCNHIT WAVSRRLYND GNRDQRNFGR NQRNNNSNRY 60
61 RNSRFNSRPR TRSREDDDEV HFDKTTFSKL IHVPKEDNSK E
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.255 | a.3.1 | Cytochrome c |
| View | Download | 0.247 | a.26.1 | 4-helical cytokines |
| View | Download | 0.320 | a.118.8 | TPR-like |
| View | Download | 0.296 | a.42.1 | MDM2 |
| View | Download | 0.239 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.239 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.221 | a.77.1 | DEATH domain |
|
Region A: Residues: [102-337] |
1 11 21 31 41 51
| | | | | |
1 VTLDSLLEEG VLDKEIHKAI TRMEFPGLTP VQQKTIKPIL SSEDHDVIAR AKTGTGKTFA 60
61 FLIPIFQHLI NTKFDSQYMV KAVIVAPTRD LALQIEAEVK KIHDMNYGLK KYACVSLVGG 120
121 TDFRAAMNKM NKLRPNIVIA TPGRLIDVLE KYSNKFFRFV DYKVLDEADR LLEIGFRDDL 180
181 ETISGILNEK NSKSADNIKT LLFSATLDDK VQKLANNIMN KKECLFLDTV DKNEPE
|
| Detection Method: | |
| Confidence: | 433.0103 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [338-494] |
1 11 21 31 41 51
| | | | | |
1 AHERIDQSVV ISEKFANSIF AAVEHIKKQI KERDSNYKAI IFAPTVKFTS FLCSILKNEF 60
61 KKDLPILEFH GKITQNKRTS LVKRFKKDES GILVCTDVGA RGMDFPNVHE VLQIGVPSEL 120
121 ANYIHRIGRT ARSGKEGSSV LFICKDELPF VRELEDA
|
| Detection Method: | |
| Confidence: | 433.0103 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [495-664] |
1 11 21 31 41 51
| | | | | |
1 KNIVIAKQEK YEPSEEIKSE VLEAVTEEPE DISDIVISLI SSYRSCIKEY RFSERRILPE 60
61 IASTYGVLLN DPQLKIPVSR RFLDKLGLSR SPIGKAMFEI RDYSSRDGNN KSYDYDDDSE 120
121 ISFRGNKNYN NRSQNRDYDD EPFRRSNNNR RSFSRSNDKN NYSSRNSNIY
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 1d2mA_ |
| Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
|
