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View Structure Prediction Details

Protein: CSN9
Organism: Saccharomyces cerevisiae
Length: 162 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN9.

Description E-value Query
Range
Subject
Range
CSN9_ASHGO - COP9 signalosome complex subunit 9 OS=Ashbya gossypii GN=CSN9 PE=3 SV=1
CSN9_ASHGO - COP9 signalosome complex subunit 9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / ...
106.0 [0..2] [160..1]
CSN9_KLULA - COP9 signalosome complex subunit 9 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 ...
CSN9_KLULA - COP9 signalosome complex subunit 9 OS=Kluyveromyces lactis GN=CSN9 PE=3 SV=1
69.0 [0..2] [156..1]
CSN9_CANGA - COP9 signalosome complex subunit 9 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC...
CSN9_CANGA - COP9 signalosome complex subunit 9 OS=Candida glabrata GN=CSN9 PE=3 SV=1
57.0 [0..19] [156..4]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMREETIKS LEDPYKYHYK EEWLNTKDPD EQQLFEIFAF GNIKDLPENI ILTSLMRSKL  60
   61 EKLTLVTLSE IYNELSYELI KEECQIEDDG IIESHLIQLQ NIFKAEMDSV SKSMKFSRRF 120
  121 DCRDVYCHEK ELTIIKNPRV TKEYLVQNLR SWETKLKQNI LE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.26
Match: 1ufmA
Description: Solution structure of the PCI domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle