| Protein: | RSM24 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 319 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSM24.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..319] | [1..319] |
|
|
4.0E-63 | [132..307] | [147..315] |
|
|
1.0E-55 | [140..299] | [72..225] |
|
|
7.0E-40 | [165..276] | [126..247] |
|
|
6.0E-39 | [165..276] | [30..151] |
|
|
8.0E-36 | [165..276] | [138..259] |
|
|
1.0E-28 | [175..267] | [280..376] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MKVPLGLWKV SRGNLWSTQK RVLTMSRCLN SDAGNEAKTV REGPAFSADL YMHPEKWKGL 60
61 PPQRILELYW ERMARLGSEY KPNKDELNAL LTTSEYSNVP VNDIKKLYHR GEQGAIDIKG 120
121 GNVNRDN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.271 | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.361 | a.118.8 | TPR-like |
| View | Download | 0.328 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.311 | f.1.1 | Colicin |
| View | Download | 0.275 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.361 | a.118.8 | TPR-like |
| View | Download | 0.328 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.311 | f.1.1 | Colicin |
| View | Download | 0.275 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.271 | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.246 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.231 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.211 | a.29.2 | Bromodomain |
| View | Download | 0.204 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.204 | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [128-319] |
1 11 21 31 41 51
| | | | | |
1 SLRPFMFDEL PSQAQELVAQ HREQRFYNRL AAYELPLLAQ YRQEYKRPSP ESHPVTYRYT 60
61 SYVGEEHPNS RKVVLSVKTK ELGLEEKSLH KFRILARSRY DHTTDIFKMS SDKFEHASQN 120
121 ARYLHDILQR LLAESKDLTE DDFSDVPLDT RHTIAKSLRK KKRDYEFPEH WKRPEDAPKK 180
181 KFDIVDQLLS TL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
