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View Structure Prediction Details

Protein: CWC15
Organism: Saccharomyces cerevisiae
Length: 175 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWC15.

Description E-value Query
Range
Subject
Range
gi|190404883 - gi|190404883|gb|EDV08150.1| pre-mRNA splicing factor CWC15 [Saccharomyces cerevisiae RM11-1a]
CWC15 - Non-essential protein involved in pre-mRNA splicing, component of a complex containing Cef1p; has si...
CWC15_YEAST - Pre-mRNA-splicing factor CWC15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWC15 PE=...
5.0E-82 [1..175] [1..175]
gi|14250229 - gi|14250229|gb|AAH08537.1| Zfp292 protein [Mus musculus]
0.003 [54..121] [1122..1192]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSHRPQLE ARSGAKAAAY TPTGIEHARL LPGHTTLKYR KFKEEENLRA NCAQEDRSND  60
   61 KSLEEAVMNE EKQDVVGSGN LQETRSEKDQ KDSLQELLVT QKNKVEDKAE LEGNEQLKGG 120
  121 NSSRRSWRKG TAFGRHKVTK ETNIKEHATK KSASGYINDM TKSEYHQEFL HKHVR

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle