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View Structure Prediction Details

Protein: RPA14
Organism: Saccharomyces cerevisiae
Length: 137 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPA14.

Description E-value Query
Range
Subject
Range
gi|49642932, gi|... - gi|50307637|ref|XP_453798.1| unnamed protein product [Kluyveromyces lactis], gi|49642932|emb|CAH0089...
gi|49642932 - gi|49642932|emb|CAH00894.1| KLLA0D16709p [Kluyveromyces lactis]
104.0 [0..1] [136..1]
gi|45200921, gi|... - gi|45200921|ref|NP_986491.1| AGL176Wp [Ashbya gossypii ATCC 10895], gi|44985691|gb|AAS54315.1| AGL17...
gi|44985691 - gi|44985691|gb|AAS54315.1| AGL176Wp [Ashbya gossypii ATCC 10895]
79.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKGSRRTGN NTATTLNTPV VIHATQLPQH VSTDEVLQFL ESFIDEKENI IDSTTMNTIS  60
   61 GNAADADAAA VANTSLNIDT NLSSSISQLK RIQRDFKGLP PAQDFSAAPI QVSTTEKKET 120
  121 SIGVSATGGK KTTFADE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 79.638272
Match: PF08203.2
Description: No description for PF08203.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.837 N/A N/A a.24.9 alpha-catenin/vinculin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle