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View Structure Prediction Details

Protein: YDR133C
Organism: Saccharomyces cerevisiae
Length: 111 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDR133C.

Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSLNTPPG VHCQPLKHQR IPLLQLQLKS QPKSQLKSQP NKVLALKLLP PTLVPLLRLC  60
   61 QLPVLCWLVL PLYCCNLLNL FFNIFLEKWL STFPSIQLPQ NRFISINKIF W

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.762 a.4.14 Description not found.
View Download 0.731 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.731 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.694 a.133.1 Phospholipase A2, PLA2
View Download 0.694 a.133.1 Phospholipase A2, PLA2
View Download 0.641 a.61.1 Retroviral matrix proteins
View Download 0.595 a.1.1 Globin-like
View Download 0.595 a.1.1 Globin-like
View Download 0.593 a.61.1 Retroviral matrix proteins
View Download 0.533 c.30.1 PreATP-grasp domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle