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View Structure Prediction Details

Protein: YDR132C
Organism: Saccharomyces cerevisiae
Length: 495 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR132C.

Description E-value Query
Range
Subject
Range
YD132_YEAST - Uncharacterized protein YDR132C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR132C ...
YDR132C - Putative protein of unknown function
0.0 [1..495] [1..495]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSPTVATL SQEYFDPNIP QILPHEKMYK IQVGKSLFKI SGASLSSDGP SFFTEYFSKK  60
   61 RSPSNNDDSN NDTMESNKNE VLFIDR

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.32
Match: 1qdvA
Description: Kv1.2
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [87-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAEVFEWIYQ HLQGYIIEIK DEVQYTMLFA DAMYYNLPRL RSLLKETDYY FTNIGGQSFK  60
   61 IAKNLFRREG DSPNYFEIYA ATVYIDVEEL IISKKL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 14.32
Match: 1qdvA
Description: Kv1.2
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [183-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRPPSHSAPY IPRSSEYFKD LLTLLGGASI DLDDNKRNAL IKECRYYRLL NLEQRLIKSH  60
   61 ISYNPITRKE EICLLLKDLS KKGITFPASS AFSTSPYFED DFCSINECDS LSKTREQPAN 120
  121 KKIKLDMTEK YNDSWNMLCY KRPFLDKHPR ELIFQINSTD CTIILNKESQ SIHVDITGES 180
  181 AYKFEALFGS HLPNTPSGAP KLKNYQYRFP SDSTQTKIET HYLLPACIYL CDLDINGIKI 240
  241 SQVQTLLTDK NKFNDRVIDV SDPLDLRFCS GLKLYLRKSL WKLAVKDGNI MLIAIKAIAF 300
  301 NGTKEYYKGY EYL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle