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View Structure Prediction Details

Protein: ARP10
Organism: Saccharomyces cerevisiae
Length: 284 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP10.

Description E-value Query
Range
Subject
Range
ACTC_BIOOB - Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 SV=1
0.0 [2..264] [5..283]
ACT2_ONCVO - Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1
gi|158594157, gi... - gi|170587336|ref|XP_001898433.1| actin 2 [Brugia malayi], gi|158594157|gb|EDP32745.1| actin 2, putat...
0.0 [2..264] [5..283]
ACT1_SCHMA - Actin-1 OS=Schistosoma mansoni PE=2 SV=1
0.0 [2..264] [5..283]
gi|9501243 - gi|9501243|emb|CAB99474.1| actin [Daphnia magna]
0.0 [2..264] [5..283]
gi|3421457 - gi|3421457|gb|AAC32224.1| cytoplasmic actin [Dreissena polymorpha]
0.0 [2..264] [5..283]
ACTB_XENBO - Actin, cytoplasmic 1 OS=Xenopus borealis GN=actb PE=3 SV=1
0.0 [2..264] [5..283]
gi|157763022 - gi|157763022|ref|XP_001673853.1| Hypothetical protein CBG23091 [Caenorhabditis briggsae AF16]
CRE18004 - RP38795 WBGene00085263 locus:Cre-act-2 status:Confirmed
act-2 - actin status:Confirmed UniProt:P10984 protein_id:CAB04675.1
gi|187021297, gi... - gi|39591934|emb|CAE75154.1| Hypothetical protein CBG23091 [Caenorhabditis briggsae], gi|187021297|em...
0.0 [2..264] [5..283]
gi|158598442, gi... - gi|170579411|ref|XP_001894819.1| actin [Brugia malayi], gi|158598442|gb|EDP36330.1| actin, putative ...
gi|6708156 - gi|6708156|gb|AAF25819.1| actin [Wuchereria bancrofti]
0.0 [2..264] [5..283]
gi|2624850 - gi|2624850|pdb|1HLU|A Chain A, Structure Of Bovine Beta-Actin-Profilin Complex With Actin Bound Atp ...
0.0 [2..264] [4..282]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTIVIVYL GANRIEIGRS ADACPQEIIA WKTGSINEKN REELKKIFEH YFQICNILGN  60
   61 REVQVLILED IFISVVEKRI ICSILFKEFD CAHVSFVPR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 124.0
Match: 1hluA_
Description: Actin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [100-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIVHCLSCNT RNAIVIDIGT NYTTCVPIFD LRPLQQFIKY SKRGKRQVES RIPLPGSLYM  60
   61 PIFFDEEYNS KNCEVDETPV INLVKNIVES LPIDLRRPLR ENIIIVNIEE AYETVIRNLF 120
  121 KLKMDTSKIQ FPKNYWQAGS ACAKILLHYK GSNIVGIERD EFYNNPHIAP DWFDYYFRTG 180
  181 VKRLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 124.0
Match: 1hluA_
Description: Actin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle