| Protein: | RRP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 278 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRP1.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..6] | [264..12] |
|
|
326.0 | [0..6] | [264..12] |
|
|
324.0 | [0..6] | [264..12] |
|
|
304.0 | [0..6] | [277..13] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 METSNFVKQL SSNNRKTRVN ALEALKKYLT AKQFKENKQI EFNKLWKGLY YAMWFSDRPR 60
61 PQQRLANELG ELHGLYFDPK DNSTADEL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.930 | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [89-278] |
1 11 21 31 41 51
| | | | | |
1 TTNDKAFIKF SRGFWKVMCF EWFNIDRYRL DKYLLLIRRV LFSQLKYLQS RNWDKKLVDE 60
61 YIKKVLRWLP LSGSPKVYTG IPIHIVDILL DEWERLLKDG DEDDEDEENK EEEMRKIAES 120
121 AKKTPLADVI AIFQDIVADY NNSKVLREKI KEDLFSDTRL VSWDILEGET QHNDSSNESE 180
181 EEEEEEWKGF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
