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View Structure Prediction Details

Protein: SHU2
Organism: Saccharomyces cerevisiae
Length: 223 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SHU2.

Description E-value Query
Range
Subject
Range
SHU2_YEAST - Suppressor of hydroxyurea sensitivity protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...
SHU2 - Protein involved in a Rad51p-, Rad54p-dependent pathway for homologous recombination repair, importa...
SHU2_YEAS2 - Suppressor of hydroxyurea sensitivity protein 2 OS=Saccharomyces cerevisiae (strain JAY291) GN=SHU2 ...
0.0 [1..223] [1..223]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKDVIEYSK LFAKLVNTND DTKLDDTIAS FLYYMFPREL FIRAISLLES SDMFIYILDR  60
   61 VHNKEGNEHT SLIDVLVDEF YKGSSNSLLE YRLIVKDTND GAPPILVDIA HWFCSCEEFC 120
  121 KYFHEALEKT DEKEELHDVL INEVDDHLQF SDDRFAQLDP HSLSKQWYFK FDKVCCSHLL 180
  181 AFSILLRSSI NVLKFFTVNS NKVFVIAIDN IDEWLNLHIN IVE

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle