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View Structure Prediction Details

Protein: AIM7
Organism: Saccharomyces cerevisiae
Length: 149 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM7.

Description E-value Query
Range		 Subject
Range
ADF1_PETHY - Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1
 1.0E-45 [2..145] [5..137]
ADF1_ARATH - Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1
gi|195604826 - gi|195604826|gb|ACG24243.1| hypothetical protein [Zea mays]
 2.0E-44 [2..145] [5..137]
gi|12861068 - gi|12861068|dbj|BAB32114.1| unnamed protein product [Mus musculus]
 2.0E-44 [1..146] [1..153]
gi|4566614 - gi|4566614|gb|AAD23407.1| actin depolymerizing factor [Populus x canescens]
 1.0E-42 [2..145] [4..136]
ADF_VITVI - Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1
 2.0E-42 [2..145] [9..141]
ADF_LILLO - Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1
 4.0E-42 [2..145] [5..137]

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Predicted Domain #1
Region A:
Residues: [1-149] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLYKIGTE TRNKIKKFRT STARTDSIKA LSIKIEPKPS YEIIVDEDEQ EELDEIEDLS  60
   61 ELAEILPDNS PRFVLTAYPT TTKDGFKQTP LVLVYWKPMT VVSQEWKMLY AGALEMIREE 120
  121 CGTFKLIEVS SGLEDDSDVE ELREQLENC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.045757
Match: 1f7sA_
Description: Cofilin (actin depolymerizing factor, ADF)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.4696097038579 bayes_pls_golite062009
protein binding 0.67192548835283 bayes_pls_golite062009
cytoskeletal protein binding 0.650246184078556 bayes_pls_golite062009
actin binding 0.598477941170392 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle