| Protein: | BAP3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 604 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BAP3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..604] | [1..604] |
|
|
0.0 | [2..603] | [4..608] |
|
|
0.0 | [1..604] | [3..609] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MSDPIVTSSK MEKSAEFEVT DSALYNNFNT STTASLTPEI KEHSEESRNG LVHRFVDSFR 60
61 RAESQRLEED NDLE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.472 | a.4.1 | Homeodomain-like |
| View | Download | 0.526 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.575 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.682 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.485 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.467 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.466 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.457 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.457 | d.58.49 | YajQ-like |
| View | Download | 0.451 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.424 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.418 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.418 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.410 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.399 | c.15.1 | BRCT domain |
| View | Download | 0.387 | a.77.1 | DEATH domain |
| View | Download | 0.385 | d.58.17 | Metal-binding domain |
| View | Download | 0.381 | a.64.1 | Saposin |
| View | Download | 0.380 | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.372 | d.45.1 | ClpS-like |
| View | Download | 0.363 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.358 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.354 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.346 | a.64.1 | Saposin |
| View | Download | 0.342 | c.47.1 | Thioredoxin-like |
| View | Download | 0.340 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.337 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.337 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.320 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.319 | a.77.1 | DEATH domain |
| View | Download | 0.314 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.305 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.302 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.298 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.298 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.290 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.288 | a.39.1 | EF-hand |
| View | Download | 0.285 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.284 | a.4.1 | Homeodomain-like |
| View | Download | 0.281 | a.2.3 | Chaperone J-domain |
| View | Download | 0.277 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.276 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.275 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.275 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.266 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.258 | d.42.1 | POZ domain |
| View | Download | 0.258 | a.39.1 | EF-hand |
| View | Download | 0.256 | a.77.1 | DEATH domain |
| View | Download | 0.254 | a.39.1 | EF-hand |
| View | Download | 0.245 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.238 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.235 | a.158.1 | F-box domain |
| View | Download | 0.235 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.234 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.232 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.232 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.231 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.227 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.214 | a.39.1 | EF-hand |
| View | Download | 0.211 | a.118.14 | FliG |
| View | Download | 0.209 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.205 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.204 | d.58.10 | Acylphosphatase-like |
| View | Download | 0.204 | d.94.1 | HPr-like |
| View | Download | 0.204 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [75-604] |
1 11 21 31 41 51
| | | | | |
1 DGTKSMKSNN HLKKSMKSRH VVMMSLGTGI GTGLLVANAK GLSLAGPGSL VIGYVMVSFV 60
61 TYFMVQAAGE MGVTYPTLPG NFNAYNSIFI SKSFGFATTW LFCIQWLTVL PLELITSSMT 120
121 VKYWNDTINA DVFIVIFYVF LLFIHFFGVK AYGETEFIFN SCKILMVAGF IILSVVINCG 180
181 GAGVDGYIGG KYWRDPGSFA EGSGATRFKG ICYILVSAYF SFGGIELFVL SINEQSNPRK 240
241 STPVAAKRSV YRILIIYLLT MILIGFNVPH NNDQLMGSGG SATHASPYVL AASIHKVRVI 300
301 PHIINAVILI SVISVANSAL YAAPRLMCSL AQQGYAPKFL NYIDREGRPL RALVVCSLVG 360
361 VVGFVACSPQ EEQAFTWLAA IAGLSELFTW SGIMLSHIRF RKAMKVQGRS LDEVGYKANT 420
421 GIWGSYYGVF FNMLVFMAQF WVALSPIGNG GKCDAQAFFE SYLAAPLWIF MYVGYMVYKR 480
481 DFTFLNPLDK IDLDFHRRVY DPEIMRQEDE ENKERLKNSS IFVRVYKFWC
|
| Detection Method: | |
| Confidence: | 225.0 |
| Match: | PF00324 |
| Description: | Amino acid permease |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
