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View Structure Prediction Details

Protein: YDR008C
Organism: Saccharomyces cerevisiae
Length: 116 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDR008C.

Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSFMLAFQ KACRQVHKQY LNKYYSVITY FLAFLTKFAI LLESFTPFVS TPPLTSTPIT  60
   61 PFNLSASPTF SGVSPPANIK CKLSGLSCLP TQSEIEFQSK SSPVPPASES NKGINE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.811 d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.653 a.29.16 Description not found.
View Download 0.611 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.611 f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.565 a.24.9 alpha-catenin/vinculin
View Download 0.542 a.24.18 Description not found.
View Download 0.528 a.24.9 alpha-catenin/vinculin
View Download 0.465 a.24.9 alpha-catenin/vinculin
View Download 0.397 d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.379 a.24.9 alpha-catenin/vinculin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle