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View Structure Prediction Details

Protein: RCR2
Organism: Saccharomyces cerevisiae
Length: 210 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RCR2.

Description E-value Query
Range
Subject
Range
gi|190405018 - gi|190405018|gb|EDV08285.1| protein RCR2 [Saccharomyces cerevisiae RM11-1a]
RCR2 - Vacuolar protein that presumably functions within the endosomal-vacuolar trafficking pathway, affect...
RCR2_YEAST - Protein RCR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RCR2 PE=1 SV=1
0.0 [1..210] [1..210]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILREQIDFL IHKRQDDNNN NGEAITDDDP FSSSSWRWGR WIFFIFFIVA LLILLFSTAK  60
   61 VNRRRRIMGQ APIRGTAWLT PPTYRQSERD YNGTQRCVED YVPEYTETAN ENDLGFYDER 120
  121 GEFHPNGKTE YLAPPPLSEE QASSTDKDLQ RPVAAVVRIP SESEFDFNLL RPTMNNFVNG 180
  181 QSNRNEQHSP TVESSSFDVN NAPARAKVSK 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle