| Protein: | THI13 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 340 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THI13.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-78 | [1..338] | [1..338] |
|
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5.0E-78 | [1..340] | [1..340] |
|
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5.0E-74 | [1..338] | [1..338] |
|
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5.0E-72 | [1..336] | [1..336] |
|
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5.0E-70 | [1..336] | [1..336] |
|
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4.0E-68 | [1..332] | [1..331] |
|
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1.0E-64 | [1..332] | [1..334] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MSTDKITFLL NWQPTPYHIP IFLAQTKGYF KEQGLDIAIL EPTNPSDVTE LIGSGKVDMG 60
61 LKAMIHTLAA KARGFPVTSV ASLLDEP
|
|
Region B: Residues: [186-288] |
1 11 21 31 41 51
| | | | | |
1 RIDKLACLGC CCFCTVLYIC NDEFLKKNPE KVRKFLKAIK KATDYVLADP VKAWKEYIDF 60
61 KPQLNNDLSY KQYQRCYAYF SSSLYNVHRD WKKVTGYGKR LAI
|
| Detection Method: |  |
| Confidence: | 25.522879 |
| Match: | 1gggA_ |
| Description: | Glutamine-binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [88-185] |
1 11 21 31 41 51
| | | | | |
1 FTGVLYLKGS GITEDFQSLK GKKIGYVGEF GKIQIDELTK HYGMKPEDYT AVRCGMNVAK 60
61 YIIEGKIDAG IGIECMQQVE LEEYLAKQGR PASDAKML
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 1gggA_ |
| Description: | Glutamine-binding protein |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [289-340] |
1 11 21 31 41 51
| | | | | |
1 LPPDYVSNYT NEYLSWPEPE EVSDPLEAQR LMAIHQEKCR QEGTFKRLAL PA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.448 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.284 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.385 | a.20.1 | PGBD-like |
| View | Download | 0.307 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.271 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.270 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.260 | a.5.2 | UBA-like |
| View | Download | 0.257 | a.4.1 | Homeodomain-like |
| View | Download | 0.254 | a.10.1 | Protozoan pheromone proteins |
| View | Download | 0.252 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.251 | a.101.1 | Uteroglobin-like |
| View | Download | 0.214 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.213 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
